RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 LAMP3Q9UQV4 416 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 TNFSF13BQ9Y275 285 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 BTBD3Q9Y2F9 522 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 FRMD4BQ9Y2L6 1034 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 ZNF335Q9H4Z2 1342 aaPredicted RBP2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 A0A0A0MQY5 61 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 C17orf113A0A1B0GUU1 675 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 TARSL2A2RTX5 802 aaKnown RBP2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 CXorf65A6NEN9 183 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 FOXO6A8MYZ6 492 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 INO80B-WBP1J3KQ70 363 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 SYN3O14994 580 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 CCNT1O60563 726 aaKnown RBP2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 PPFIA2O75334 1257 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 TOP3BO95985 862 aaKnown RBP2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 SERPINC1P01008 464 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 ABCD3P28288 659 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 HOXD9P28356 352 aaPredicted RBP2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 EPHA8P29322 1005 aaPredicted RBP2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 EPHB2P29323 1055 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 MPGP29372 298 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 CHRNA5P30532 468 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 SLC16A2P36021 539 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 CENPAP49450 140 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 CASP6P55212 293 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 CDH15P55291 814 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 RPS13P62277 151 aaKnown RBP2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 GHRHRQ02643 423 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 IL13RA2Q14627 380 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 RALBP1Q15311 655 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 NFIL3Q16649 462 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 SUPT20HL1Q3ZLR7 823 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 C5orf22Q49AR2 442 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 SLC9C1Q4G0N8 1177 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 TTC39AQ5SRH9 613 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 LCE1AQ5T7P2 110 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 FAM171A1Q5VUB5 890 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 MIS18BP1Q6P0N0 1132 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 AAGABQ6PD74 315 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 SYCE2Q6PIF2 218 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 PRSS45Q7RTY3 260 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 KDELC2Q7Z4H8 507 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 YTHDF3Q7Z739 585 aaKnown RBP2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 TBC1D1Q86TI0 1168 aaPredicted RBP2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 ARMC8Q8IUR7 673 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 DDIASQ8IXT1 998 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 ZDHHC23Q8IYP9 409 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 KDM1BQ8NB78 822 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 PPHLN1Q8NEY8 458 aaKnown RBP2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 TNIP2Q8NFZ5 429 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 OR4N2Q8NGD1 307 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 PIGOQ8TEQ8 1089 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 RUFY2Q8WXA3 655 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 CNOT9Q92600 299 aaKnown RBP2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 ZUFSPQ96AP4 578 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 SKA1Q96BD8 255 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 C7orf26Q96N11 449 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 NR1H4Q96RI1 486 aaPredicted RBP2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 LBHD1Q9BQE6 289 aaPredicted RBP2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 TMEM79Q9BSE2 394 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 TUBB6Q9BUF5 446 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 USP44Q9H0E7 712 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 HIPK3Q9H422 1215 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 MROH8Q9H579 483 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 EPHX3Q9H6B9 360 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 ACAD9Q9H845 621 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 RNF146Q9NTX7 359 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 TMEM45AQ9NWC5 275 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 KLHL13Q9P2N7 655 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 SLC25A13Q9UJS0 675 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 SUFUQ9UMX1 484 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 NAALADL1Q9UQQ1 740 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 TTBK1Q5TCY1 1321 aaPredicted RBP2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 ITIH6Q6UXX5 1313 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 ADGRF5Q8IZF2 1346 aa2.07□□□□□ -2.08
NUCKS1-202ENST00000464938 ARHGEF17Q96PE2 2063 aaPredicted RBP2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 A0A087X0M5 115 aa2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 A0A1B0GX30 115 aa2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 CBY3A6NI87 242 aa2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 FAM157AC9JC47 383 aa2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 F8W810 466 aa2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 TNPO2O14787 897 aaKnown RBP2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 PER2O15055 1255 aa2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 RNMTO43148 476 aaKnown RBP2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 MSI1O43347 362 aaKnown RBP2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 TNFSF14O43557 240 aa2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 UGDHO60701 494 aa2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 DDX58O95786 925 aaKnown RBP2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 TBX18O95935 607 aa2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 ADAP00813 363 aa2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 IFNA2P01563 188 aa2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 PRR35P0CG20 571 aa2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 COX7A2P14406 83 aa2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 ITGB6P18564 788 aa2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 CAPN3P20807 821 aa2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 TNFAIP3P21580 790 aa2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 CD38P28907 300 aa2.06□□□□□ -2.08
NUCKS1-202ENST00000464938 PTPN9P43378 593 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms