RNA–Protein interactions for RNA: ENST00000464833.1

CHRD-211, Transcript of chordin, humanhuman

TSL 5

Gene CHRD, Length 1,340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-211ENST00000464833 ANKRD20A8PQ5CZ79 823 aa28.21■■■□□ 2.11
CHRD-211ENST00000464833 ZFYVE27Q5T4F4 411 aa28.21■■■□□ 2.11
CHRD-211ENST00000464833 VSIG1Q86XK7 387 aa28.21■■■□□ 2.11
CHRD-211ENST00000464833 ATP11CQ8NB49 1132 aa28.21■■■□□ 2.11
CHRD-211ENST00000464833 TPSD1Q9BZJ3 242 aa28.21■■■□□ 2.11
CHRD-211ENST00000464833 TSGA10Q9BZW7 698 aa28.21■■■□□ 2.11
CHRD-211ENST00000464833 SLC6A17Q9H1V8 727 aa28.21■■■□□ 2.11
CHRD-211ENST00000464833 FBRSQ9HAH7 460 aa28.21■■■□□ 2.11
CHRD-211ENST00000464833 VPS13AQ96RL7 3174 aa28.21■■■□□ 2.11
CHRD-211ENST00000464833 SMAD6O43541 496 aaKnown RBP28.2■■■□□ 2.11
CHRD-211ENST00000464833 KRT1P04264 644 aa28.2■■■□□ 2.11
CHRD-211ENST00000464833 ZNF662Q6ZS27 426 aa28.2■■■□□ 2.11
CHRD-211ENST00000464833 KIAA1524Q8TCG1 905 aa28.2■■■□□ 2.11
CHRD-211ENST00000464833 FAM86C1Q9NVL1 165 aa28.2■■■□□ 2.11
CHRD-211ENST00000464833 ACTL7AQ9Y615 435 aa28.2■■■□□ 2.11
CHRD-211ENST00000464833 R4GN57 208 aa28.2■■■□□ 2.11
CHRD-211ENST00000464833 ZSCAN5CA6NGD5 496 aaPredicted RBP28.19■■■□□ 2.1
CHRD-211ENST00000464833 ARHGAP42A6NI28 874 aa28.19■■■□□ 2.1
CHRD-211ENST00000464833 ZBTB24O43167 697 aaPredicted RBP28.19■■■□□ 2.1
CHRD-211ENST00000464833 MARCKSL1P49006 195 aa28.19■■■□□ 2.1
CHRD-211ENST00000464833 PAPOLAP51003 745 aaKnown RBP28.19■■■□□ 2.1
CHRD-211ENST00000464833 GEMIN4P57678 1058 aaKnown RBP28.19■■■□□ 2.1
CHRD-211ENST00000464833 ACCSLQ4AC99 568 aa28.19■■■□□ 2.1
CHRD-211ENST00000464833 ZC3H14Q6PJT7 736 aaKnown RBP28.19■■■□□ 2.1
CHRD-211ENST00000464833 TMPRSS6Q8IU80 811 aa28.19■■■□□ 2.1
CHRD-211ENST00000464833 TP53INP2Q8IXH6 220 aa28.19■■■□□ 2.1
CHRD-211ENST00000464833 RNF10Q8N5U6 811 aaKnown RBP28.19■■■□□ 2.1
CHRD-211ENST00000464833 PQLC3Q8N755 202 aa28.19■■■□□ 2.1
CHRD-211ENST00000464833 NETO2Q8NC67 525 aa28.19■■■□□ 2.1
CHRD-211ENST00000464833 KCNF1Q9H3M0 494 aa28.19■■■□□ 2.1
CHRD-211ENST00000464833 NBL1P41271 181 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 NCBP2-AS2Q69YL0 99 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 C22orf39Q6P5X5 142 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 Q6ZVU0 165 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 ZNF354CQ86Y25 554 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 KATNAL2Q8IYT4 538 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 PGBD3Q8N328 593 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 KRT35Q92764 455 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 RNF157Q96PX1 679 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 CEP44Q9C0F1 390 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 RSPH9Q9H1X1 276 aaPredicted RBP28.18■■■□□ 2.1
CHRD-211ENST00000464833 PRDM16Q9HAZ2 1276 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 PDFQ9HBH1 243 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 SPAG17Q6Q759 2223 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 HRO43593 1189 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 KRT86O43790 486 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 ZNF821O75541 412 aaPredicted RBP28.18■■■□□ 2.1
CHRD-211ENST00000464833 PTMAP06454 111 aaKnown RBP28.18■■■□□ 2.1
CHRD-211ENST00000464833 CNR2P34972 360 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 CTNNA1P35221 906 aaKnown RBP28.18■■■□□ 2.1
CHRD-211ENST00000464833 SERPINB6P35237 376 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 NHLH1Q02575 133 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 PAFAH1B3Q15102 231 aaKnown RBP28.18■■■□□ 2.1
CHRD-211ENST00000464833 FAM129BQ96TA1 746 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 CAPN6Q9Y6Q1 641 aa28.18■■■□□ 2.1
CHRD-211ENST00000464833 DFFAO00273 331 aa28.17■■■□□ 2.1
CHRD-211ENST00000464833 PRAMEF11O60813 436 aa28.17■■■□□ 2.1
CHRD-211ENST00000464833 PALMO75781 387 aa28.17■■■□□ 2.1
CHRD-211ENST00000464833 SRSF5Q13243 272 aaKnown RBP28.17■■■□□ 2.1
CHRD-211ENST00000464833 ELAVL3Q14576 367 aaKnown RBP28.17■■■□□ 2.1
CHRD-211ENST00000464833 TAZQ16635 292 aa28.17■■■□□ 2.1
CHRD-211ENST00000464833 KIAA1324Q6UXG2 1013 aaKnown RBP28.17■■■□□ 2.1
CHRD-211ENST00000464833 LEKR1Q6ZMV7 388 aa28.17■■■□□ 2.1
CHRD-211ENST00000464833 METTL3Q86U44 580 aaKnown RBP28.17■■■□□ 2.1
CHRD-211ENST00000464833 NT5DC3Q86UY8 548 aa28.17■■■□□ 2.1
CHRD-211ENST00000464833 STK40Q8N2I9 435 aa28.17■■■□□ 2.1
CHRD-211ENST00000464833 GAB3Q8WWW8 586 aa28.17■■■□□ 2.1
CHRD-211ENST00000464833 RNF25Q96BH1 459 aaPredicted RBP28.17■■■□□ 2.1
CHRD-211ENST00000464833 SIPA1Q96FS4 1042 aa28.17■■■□□ 2.1
CHRD-211ENST00000464833 PPP2R2CQ9Y2T4 447 aa28.17■■■□□ 2.1
CHRD-211ENST00000464833 FCF1Q9Y324 198 aaKnown RBP28.17■■■□□ 2.1
CHRD-211ENST00000464833 SBDSQ9Y3A5 250 aaKnown RBP eCLIP28.17■■■□□ 2.1
CHRD-211ENST00000464833 J3KR12 359 aa28.16■■■□□ 2.1
CHRD-211ENST00000464833 MFSD11O43934 449 aa28.16■■■□□ 2.1
CHRD-211ENST00000464833 CTNNA2P26232 953 aa28.16■■■□□ 2.1
CHRD-211ENST00000464833 RPS14P62263 151 aaKnown RBP28.16■■■□□ 2.1
CHRD-211ENST00000464833 MAP7D1Q3KQU3 841 aa28.16■■■□□ 2.1
CHRD-211ENST00000464833 USP39Q53GS9 565 aaKnown RBP28.16■■■□□ 2.1
CHRD-211ENST00000464833 ZNF776Q68DI1 518 aaPredicted RBP28.16■■■□□ 2.1
CHRD-211ENST00000464833 MFSD7Q6UXD7 560 aa28.16■■■□□ 2.1
CHRD-211ENST00000464833 ARHGAP36Q6ZRI8 547 aa28.16■■■□□ 2.1
CHRD-211ENST00000464833 SYCE1Q8N0S2 351 aa28.16■■■□□ 2.1
CHRD-211ENST00000464833 PCDH20Q8N6Y1 951 aaKnown RBP28.16■■■□□ 2.1
CHRD-211ENST00000464833 CASKIN2Q8WXE0 1202 aa28.16■■■□□ 2.1
CHRD-211ENST00000464833 PRCCQ92733 491 aaPredicted RBP28.16■■■□□ 2.1
CHRD-211ENST00000464833 ISG20Q96AZ6 181 aaKnown RBP28.16■■■□□ 2.1
CHRD-211ENST00000464833 GUCA1BQ9UMX6 200 aa28.16■■■□□ 2.1
CHRD-211ENST00000464833 PCDHA3Q9Y5H8 950 aa28.16■■■□□ 2.1
CHRD-211ENST00000464833 RPP40O75818 363 aaKnown RBP28.15■■■□□ 2.1
CHRD-211ENST00000464833 P2RY2P41231 377 aa28.15■■■□□ 2.1
CHRD-211ENST00000464833 CDKN2BP42772 138 aa28.15■■■□□ 2.1
CHRD-211ENST00000464833 INO80DQ53TQ3 878 aaPredicted RBP28.15■■■□□ 2.1
CHRD-211ENST00000464833 OR2A12Q8NGT7 310 aa28.15■■■□□ 2.1
CHRD-211ENST00000464833 RLN3Q8WXF3 142 aa28.15■■■□□ 2.1
CHRD-211ENST00000464833 ZNF830Q96NB3 372 aaPredicted RBP28.15■■■□□ 2.1
CHRD-211ENST00000464833 USP36Q9P275 1121 aaKnown RBP28.15■■■□□ 2.1
CHRD-211ENST00000464833 SHROOM3Q8TF72 1996 aa28.14■■■□□ 2.1
CHRD-211ENST00000464833 MCF2LO15068 1137 aa28.14■■■□□ 2.09
CHRD-211ENST00000464833 ALOX15BO15296 676 aa28.14■■■□□ 2.09
CHRD-211ENST00000464833 TMCC1O94876 653 aa28.14■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms