RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 COPG1Q9Y678 874 aaKnown RBP7.42□□□□□ -1.22
USP48-206ENST00000464577 PTPRFP10586 1907 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 A0A087WXM4 84 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 ZCWPW2A0A1B0GU75 182 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 KDM4FA0A1W2PPD8 638 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 KANSL1LA0AUZ9 987 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 E2F8A0AVK6 867 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 TRIM64A6NGJ6 449 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 TRPC5OSA6NMA1 111 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 LACTBL1A8MY62 500 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 STX16-NPEPL1H3BU86 382 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 TRIM24O15164 1050 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 MAGEB3O15480 346 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 MGAMO43451 1857 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 HTRA2O43464 458 aaPredicted RBP7.42□□□□□ -1.22
USP48-206ENST00000464577 AMHP03971 560 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 FAM163BP0C2L3 166 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 CYP2C8P10632 490 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 MCF2P10911 925 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 YY1P25490 414 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 PSMB4P28070 264 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 MSX2P35548 267 aaPredicted RBP7.42□□□□□ -1.22
USP48-206ENST00000464577 ARL4AP40617 200 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 NDST2P52849 883 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 OSTNP61366 133 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 ESRRGP62508 458 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 PHEXP78562 749 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 TNFAIP2Q03169 654 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 MPP3Q13368 585 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 ANO4Q32M45 955 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 SLC44A4Q53GD3 710 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 PPP4R4Q6NUP7 873 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 PMF1Q6P1K2 205 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 DPH6Q7L8W6 267 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 SLC26A9Q7LBE3 791 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 GPR141Q7Z602 305 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 GPR180Q86V85 440 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 TMEM192Q8IY95 271 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 TMEM151AQ8N4L1 468 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 TERB1Q8NA31 727 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 AGBL3Q8NEM8 1001 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 TNIP2Q8NFZ5 429 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 AGR3Q8TD06 166 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 STYXQ8WUJ0 223 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 SLC35F5Q8WV83 523 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 SNRNP27Q8WVK2 155 aaKnown RBP7.42□□□□□ -1.22
USP48-206ENST00000464577 ATP6V1E2Q96A05 226 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 ZNF669Q96BR6 464 aaPredicted RBP7.42□□□□□ -1.22
USP48-206ENST00000464577 P2RY11Q96G91 374 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 C12orf42Q96LP6 360 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 TEPSINQ96N21 525 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 TSNARE1Q96NA8 513 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 LGMNQ99538 433 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 EFHD1Q9BUP0 239 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 C1QTNF1Q9BXJ1 281 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 CAAP1Q9H8G2 361 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 NSMCE4AQ9NXX6 385 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 WDR37Q9Y2I8 494 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 PCDHGA7Q9Y5G6 932 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 DOCK1Q14185 1865 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 HEATR9A2RTY3 570 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 XPO1O14980 1071 aaKnown RBP7.41□□□□□ -1.22
USP48-206ENST00000464577 B4GALT5O43286 388 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 MFSD11O43934 449 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 NPHS1O60500 1241 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 RAD17O75943 681 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 DDHD2O94830 711 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 SBK3P0C264 359 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 STAG3L1P0CL83 205 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 COL6A2P12110 1019 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 BMP2P12643 396 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 PORP16435 677 aaPredicted RBP7.41□□□□□ -1.22
USP48-206ENST00000464577 TFE3P19532 575 aaPredicted RBP7.41□□□□□ -1.22
USP48-206ENST00000464577 VARSP26640 1264 aaKnown RBP7.41□□□□□ -1.22
USP48-206ENST00000464577 HMOX2P30519 316 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 BACE1P56817 501 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 RBP5P82980 135 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 PLOD1Q02809 727 aaPredicted RBP7.41□□□□□ -1.22
USP48-206ENST00000464577 MBTD1Q05BQ5 628 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 IFRD2Q12894 506 aaPredicted RBP7.41□□□□□ -1.22
USP48-206ENST00000464577 STX5Q13190 355 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 TMEM132BQ14DG7 1078 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 NRF1Q16656 503 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 KYAT1Q16773 422 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 NHSL2Q5HYW2 709 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 BSPRYQ5W0U4 402 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 TMEM198Q66K66 360 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 CES3Q6UWW8 571 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 HACD2Q6Y1H2 254 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 CHSY3Q70JA7 882 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 STRADAQ7RTN6 431 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 LSMEM2Q8N112 164 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 PELI3Q8N2H9 469 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 RNF148Q8N7C7 305 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 MFSD2AQ8NA29 543 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 ANKRD52Q8NB46 1076 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 ZNF420Q8TAQ5 688 aaPredicted RBP7.41□□□□□ -1.22
USP48-206ENST00000464577 SEPT1Q8WYJ6 367 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 LRTOMTQ8WZ04 291 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 BORCS5Q969J3 196 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms