RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 SEMA4GQ9NTN9 838 aa17.42■□□□□ 0.38
VPS52-215ENST00000464425 WSB2Q9NYS7 404 aaPredicted RBP17.42■□□□□ 0.38
VPS52-215ENST00000464425 HS3ST2Q9Y278 367 aa17.42■□□□□ 0.38
VPS52-215ENST00000464425 ACTL7AQ9Y615 435 aa17.42■□□□□ 0.38
VPS52-215ENST00000464425 CFAP54Q96N23 3096 aa17.42■□□□□ 0.38
VPS52-215ENST00000464425 BCLAF3A2AJT9 711 aaKnown RBP17.41■□□□□ 0.38
VPS52-215ENST00000464425 RCCD1A6NED2 376 aa17.41■□□□□ 0.38
VPS52-215ENST00000464425 EEF2KO00418 725 aaKnown RBP17.41■□□□□ 0.38
VPS52-215ENST00000464425 RAMP2O60895 175 aa17.41■□□□□ 0.38
VPS52-215ENST00000464425 ZMPSTE24O75844 475 aa17.41■□□□□ 0.38
VPS52-215ENST00000464425 OXTRP30559 389 aa17.41■□□□□ 0.38
VPS52-215ENST00000464425 MPLP40238 635 aa17.41■□□□□ 0.38
VPS52-215ENST00000464425 SSR1P43307 286 aaKnown RBP17.41■□□□□ 0.38
VPS52-215ENST00000464425 PSMD8P48556 350 aa17.41■□□□□ 0.38
VPS52-215ENST00000464425 ZBTB16Q05516 673 aa17.41■□□□□ 0.38
VPS52-215ENST00000464425 POLD3Q15054 466 aaPredicted RBP17.41■□□□□ 0.38
VPS52-215ENST00000464425 CST6Q15828 149 aa17.41■□□□□ 0.38
VPS52-215ENST00000464425 CYP2U1Q7Z449 544 aa17.41■□□□□ 0.38
VPS52-215ENST00000464425 KIAA1328Q86T90 577 aa17.41■□□□□ 0.38
VPS52-215ENST00000464425 ZNF354CQ86Y25 554 aa17.41■□□□□ 0.38
VPS52-215ENST00000464425 HSPH1Q92598 858 aa17.41■□□□□ 0.38
VPS52-215ENST00000464425 PIGKQ92643 395 aa17.41■□□□□ 0.38
VPS52-215ENST00000464425 ARHGEF2Q92974 986 aaKnown RBP17.41■□□□□ 0.38
VPS52-215ENST00000464425 DESI2Q9BSY9 194 aa17.41■□□□□ 0.38
VPS52-215ENST00000464425 ACE2Q9BYF1 805 aaPredicted RBP17.41■□□□□ 0.38
VPS52-215ENST00000464425 MAGEH1Q9H213 219 aa17.41■□□□□ 0.38
VPS52-215ENST00000464425 NOL6Q9H6R4 1146 aaKnown RBP17.41■□□□□ 0.38
VPS52-215ENST00000464425 PCDHGA5Q9Y5G8 931 aa17.41■□□□□ 0.38
VPS52-215ENST00000464425 MID1O15344 667 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 DAPK3O43293 454 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 IL1BP01584 269 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 IGLV3-19P01714 112 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 CCDC175P0C221 793 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 GOT1P17174 413 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 ITPKAP23677 461 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 SLC8A1P32418 973 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 ETFBP38117 255 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 ARF5P84085 180 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 KIF5AQ12840 1032 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 CSRP2Q16527 193 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 TTC31Q49AM3 519 aaPredicted RBP17.4■□□□□ 0.38
VPS52-215ENST00000464425 BOLA3Q53S33 107 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 SPDYCQ5MJ68 293 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 LYSMD4Q5XG99 296 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 TXNRD3NBQ6F5E7 133 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 RETSATQ6NUM9 610 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 LEKR1Q6ZMV7 388 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 ZNF662Q6ZS27 426 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 CPNE8Q86YQ8 564 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 SLC41A1Q8IVJ1 513 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 GPR161Q8N6U8 529 aaKnown RBP17.4■□□□□ 0.38
VPS52-215ENST00000464425 HSPA12BQ96MM6 686 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 LACRTQ9GZZ8 138 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 TNKS2Q9H2K2 1166 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 PABPC3Q9H361 631 aaKnown RBP17.4■□□□□ 0.38
VPS52-215ENST00000464425 KCNF1Q9H3M0 494 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 FBXL12Q9NXK8 326 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 HPCAL4Q9UM19 191 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 TFR2Q9UP52 801 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.4■□□□□ 0.38
VPS52-215ENST00000464425 ZNF292O60281 2723 aa17.4■□□□□ 0.38
VPS52-215ENST00000464425 TMEM110-MUSTN1A8MSY1 372 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 WASH4PA8MWX3 477 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 FGF10O15520 208 aaPredicted RBP17.39■□□□□ 0.37
VPS52-215ENST00000464425 LRP3O75074 770 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 PROSCO94903 275 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 RARAP10276 462 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 C7P10643 843 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 ACSL1P33121 698 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 MAN1A1P33908 653 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 HTR7P34969 479 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 NOP2P46087 812 aaKnown RBP17.39■□□□□ 0.37
VPS52-215ENST00000464425 DNA2P51530 1060 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 CLCN6P51797 869 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 ZNF33AQ06730 810 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 SLC20A2Q08357 652 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 ELAVL3Q14576 367 aaKnown RBP17.39■□□□□ 0.37
VPS52-215ENST00000464425 SF3A2Q15428 464 aaKnown RBP17.39■□□□□ 0.37
VPS52-215ENST00000464425 PLA2G2CQ5R387 149 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 RFX8Q6ZV50 586 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 PSTKQ8IV42 348 aaKnown RBP17.39■□□□□ 0.37
VPS52-215ENST00000464425 OR8D1Q8WZ84 308 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 HMCESQ96FZ2 354 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 ZNF419Q96HQ0 510 aaPredicted RBP17.39■□□□□ 0.37
VPS52-215ENST00000464425 TSGA10Q9BZW7 698 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 TMEM74BQ9NUR3 256 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 CWC15Q9P013 229 aaKnown RBP17.39■□□□□ 0.37
VPS52-215ENST00000464425 SERGEFQ9UGK8 458 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 NCKAP1Q9Y2A7 1128 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 FCF1Q9Y324 198 aaKnown RBP17.39■□□□□ 0.37
VPS52-215ENST00000464425 DUSP10Q9Y6W6 482 aa17.39■□□□□ 0.37
VPS52-215ENST00000464425 ATXN2Q99700 1313 aaKnown RBP17.39■□□□□ 0.37
VPS52-215ENST00000464425 RALGAPA1Q6GYQ0 2036 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 NUMA1Q14980 2115 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 A0A1W2PP55 124 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 RASA4BC9J798 803 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 RASA4O43374 803 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 KDELR3O43731 214 aa17.38■□□□□ 0.37
VPS52-215ENST00000464425 RNASEH2AO75792 299 aaKnown RBP17.38■□□□□ 0.37
VPS52-215ENST00000464425 ZNF806P0C7X5 589 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms