RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 DPP6P42658 865 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 GALCP54803 685 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 SEMA3BQ13214 749 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 DAB2IPQ5VWQ8 1189 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 IL31Q6EBC2 164 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 ARHGEF2Q92974 986 aaKnown RBP13.27□□□□□ -0.29
XRN1-203ENST00000463916 TBC1D31Q96DN5 1066 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 OMDQ99983 421 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 ORAI3Q9BRQ5 295 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 ACE2Q9BYF1 805 aaPredicted RBP13.27□□□□□ -0.29
XRN1-203ENST00000463916 TNKS2Q9H2K2 1166 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 NOL6Q9H6R4 1146 aaKnown RBP13.27□□□□□ -0.29
XRN1-203ENST00000463916 SGK2Q9HBY8 427 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 TMEM9BQ9NQ34 198 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 GPATCH2LQ9NWQ4 482 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 NCKAP1Q9Y2A7 1128 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 BZW2Q9Y6E2 419 aaKnown RBP13.27□□□□□ -0.29
XRN1-203ENST00000463916 CACNA1EQ15878 2313 aa13.26□□□□□ -0.29
XRN1-203ENST00000463916 CHD5Q8TDI0 1954 aa13.26□□□□□ -0.29
XRN1-203ENST00000463916 C10orf142B7Z368 130 aa13.26□□□□□ -0.29
XRN1-203ENST00000463916 CREB3O43889 395 aa13.26□□□□□ -0.29
XRN1-203ENST00000463916 C5AR1P21730 350 aa13.26□□□□□ -0.29
XRN1-203ENST00000463916 GFPT1Q06210 699 aaPredicted RBP13.26□□□□□ -0.29
XRN1-203ENST00000463916 CA9Q16790 459 aa13.26□□□□□ -0.29
XRN1-203ENST00000463916 EFHC2Q5JST6 749 aa13.26□□□□□ -0.29
XRN1-203ENST00000463916 NCEH1Q6PIU2 408 aa13.26□□□□□ -0.29
XRN1-203ENST00000463916 CYP4V2Q6ZWL3 525 aaPredicted RBP13.26□□□□□ -0.29
XRN1-203ENST00000463916 CHST14Q8NCH0 376 aa13.26□□□□□ -0.29
XRN1-203ENST00000463916 SNX19Q92543 992 aa13.26□□□□□ -0.29
XRN1-203ENST00000463916 GTPBP2Q9BX10 602 aaKnown RBP13.26□□□□□ -0.29
XRN1-203ENST00000463916 EBF2Q9HAK2 575 aa13.26□□□□□ -0.29
XRN1-203ENST00000463916 PCSK1NQ9UHG2 260 aa13.26□□□□□ -0.29
XRN1-203ENST00000463916 ASCC3Q8N3C0 2202 aaKnown RBP13.26□□□□□ -0.29
XRN1-203ENST00000463916 ARHGAP33O14559 1287 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 FSBPO95073 299 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 ADH1BP00325 375 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 GOT1P17174 413 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 EPHB2P29323 1055 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 MAPKAPK2P49137 400 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 BNC1Q01954 994 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.25□□□□□ -0.29
XRN1-203ENST00000463916 LEKR1Q6ZMV7 388 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 OR8D1Q8WZ84 308 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 THAP2Q9H0W7 228 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 PCED1AQ9H1Q7 454 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 FZD4Q9ULV1 537 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 KNL1Q8NG31 2342 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 A0A1B0GTW7 788 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 BCAT2O15382 392 aaPredicted RBP13.25□□□□□ -0.29
XRN1-203ENST00000463916 GNSP15586 552 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 MIPP30301 263 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 SERPINH1P50454 418 aaKnown RBP13.25□□□□□ -0.29
XRN1-203ENST00000463916 ADPRHP54922 357 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 UAP1L1Q3KQV9 507 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 PPM1JQ5JR12 505 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 OR14C36Q8NHC7 312 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 PIP4K2CQ8TBX8 421 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 FNIP1Q8TF40 1166 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 FAM131CQ96AQ9 280 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 IQCDQ96DY2 449 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 KLC2Q9H0B6 622 aa13.25□□□□□ -0.29
XRN1-203ENST00000463916 FCF1Q9Y324 198 aaKnown RBP13.25□□□□□ -0.29
XRN1-203ENST00000463916 RAMP2O60895 175 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 LRCH4O75427 683 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 TCF4P15884 667 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 HNRNPH3P31942 346 aaKnown RBP13.24□□□□□ -0.29
XRN1-203ENST00000463916 CSNK1EP49674 416 aaKnown RBP13.24□□□□□ -0.29
XRN1-203ENST00000463916 AIF1P55008 147 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 CNTN1Q12860 1018 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 GRIK2Q13002 908 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 POLD3Q15054 466 aaPredicted RBP13.24□□□□□ -0.29
XRN1-203ENST00000463916 KIAA0895LQ68EN5 471 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 SPECC1LQ69YQ0 1117 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 RETSATQ6NUM9 610 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 C22orf39Q6P5X5 142 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 LAYNQ6UX15 382 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 DPY19L3Q6ZPD9 716 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 RABEPKQ7Z6M1 372 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 MINDY1Q8N5J2 469 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 RTL3Q8N8U3 475 aaKnown RBP13.24□□□□□ -0.29
XRN1-203ENST00000463916 NETO2Q8NC67 525 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 ARHGEF26Q96DR7 871 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 BTBD6Q96KE9 485 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 SNRNP25Q9BV90 132 aaKnown RBP13.24□□□□□ -0.29
XRN1-203ENST00000463916 MAGEH1Q9H213 219 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 RETREG1Q9H6L5 497 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 SUSD2Q9UGT4 822 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 NENFQ9UMX5 172 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 AP4E1Q9UPM8 1137 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.24□□□□□ -0.295e-9■□□□□ 10
XRN1-203ENST00000463916 GIPC1O14908 333 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 ALOX15BO15296 676 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 MYBL1P10243 752 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 CHRNA3P32297 505 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 CLCN6P51797 869 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 SLC20A2Q08357 652 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 ERMARDQ5T6L9 678 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 AGBL4Q5VU57 503 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 DSG4Q86SJ6 1040 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 OR2T34Q8NGX1 318 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms