RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 ERVMER34-1Q9H9K5 563 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 JMJD4Q9H9V9 463 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 SYTL2Q9HCH5 934 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 FAM105AQ9NUU6 356 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 TMLHEQ9NVH6 421 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 CUEDC1Q9NWM3 386 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PAQR5Q9NXK6 330 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PRKAG2Q9UGJ0 569 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 SEPT3Q9UH03 358 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 ENOPH1Q9UHY7 261 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 TAGLN3Q9UI15 199 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 SLC24A2Q9UI40 661 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 TLK1Q9UKI8 766 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 OGDHLQ9ULD0 1010 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PLA2G4CQ9UP65 541 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 FAM50BQ9Y247 325 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 TMEM5Q9Y2B1 443 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 MAP3K2Q9Y2U5 619 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 MTO1Q9Y2Z2 717 aaKnown RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 AP4S1Q9Y587 144 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PCDHB4Q9Y5E5 795 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 MAST3O60307 1309 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 TRAV20A0A0B4J274 112 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PNMA6FA0A0J9YX94 578 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PVALEFA0A1B0GWK0 134 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 FIGNL2A6NMB9 653 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PRR5-ARHGAP8B1AHC4 643 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 H3BNX3 289 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 DNALI1O14645 258 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 DYNC1LI2O43237 492 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 SPOPO43791 374 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 EGFRP00533 1210 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 CD4P01730 458 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PROCP04070 461 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 EEF1B2P24534 225 aaKnown RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 RRM2P31350 389 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 TTKP33981 857 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 MCM7P33993 719 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 HSD17B2P37059 387 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 GRIA3P42263 894 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 ALDH3B2P48448 385 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 HCAR3P49019 387 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 SEPHS1P49903 392 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 SERPINH1P50454 418 aaKnown RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 KCNQ4P56696 695 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 RPS6P62753 249 aaKnown RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 ARHGAP8P85298 464 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 SEMA3AQ14563 771 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF267Q14586 743 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 TAF5Q15542 800 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 RAB30Q15771 203 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 RTN1Q16799 776 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 ZBED5Q49AG3 693 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 FAM47CQ5HY64 1035 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 FAM83BQ5T0W9 1011 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 OGFRL1Q5TC84 451 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 NDUFAF5Q5TEU4 345 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 DCAF12L1Q5VU92 463 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 ARL6IP4Q66PJ3 421 aaKnown RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 IQSEC1Q6DN90 963 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 TTC27Q6P3X3 843 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 LDHAL6AQ6ZMR3 332 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PRICKLE2Q7Z3G6 844 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 FAM83AQ86UY5 434 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 CDR2LQ86X02 465 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 SYNE4Q8N205 404 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PQLC1Q8N2U9 271 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 RASGEF1CQ8N431 466 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF366Q8N895 744 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 LRRC57Q8N9N7 239 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 POMGNT1Q8WZA1 660 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 TP53INP1Q96A56 240 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 TTC17Q96AE7 1141 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 SH3KBP1Q96B97 665 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF837Q96EG3 531 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PPP1R36Q96LQ0 422 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 MTG1Q9BT17 334 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 WACQ9BTA9 647 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 C1orf50Q9BV19 199 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 RHOBTB2Q9BYZ6 727 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 SEMA6AQ9H2E6 1030 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 RMND5AQ9H871 391 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 OSGEPQ9NPF4 335 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 SEPT11Q9NVA2 429 aaKnown RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 RIC8BQ9NVN3 520 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 SPATA6Q9NWH7 488 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 BABAM1Q9NWV8 329 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF221Q9UK13 617 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 STRIP2Q9ULQ0 834 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 RPH3AQ9Y2J0 694 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PCDHGB3Q9Y5G1 929 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PLXNB2O15031 1838 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 A0A1W2PPM1 405 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 CAPN14A8MX76 684 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 F8W810 466 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 NOP56O00567 594 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 RAD51BO15315 384 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 EFSO43281 561 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms