RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 SH2D3CQ8N5H7 860 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 RPRD1AQ96P16 312 aaPredicted RBP14.85□□□□□ -0.03
SMC1A-204ENST00000463684 NT5C1BQ96P26 610 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 NOX5Q96PH1 765 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 PRMT1Q99873 361 aaKnown RBP14.85□□□□□ -0.03
SMC1A-204ENST00000463684 POPDC2Q9HBU9 364 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 WDR70Q9NW82 654 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 ARMCX3Q9UH62 379 aaPredicted RBP14.85□□□□□ -0.03
SMC1A-204ENST00000463684 IL17BQ9UHF5 180 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 IPO11Q9UI26 975 aaKnown RBP14.85□□□□□ -0.03
SMC1A-204ENST00000463684 ENTPD2Q9Y5L3 495 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 HS3ST3A1Q9Y663 406 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 ARID1BQ8NFD5 2236 aaPredicted RBP14.84□□□□□ -0.03
SMC1A-204ENST00000463684 HSP90AA1P07900 732 aaKnown RBP14.84□□□□□ -0.03
SMC1A-204ENST00000463684 CHRNA3P32297 505 aa14.84□□□□□ -0.03
SMC1A-204ENST00000463684 GPD2P43304 727 aa14.84□□□□□ -0.03
SMC1A-204ENST00000463684 NDUFA8P51970 172 aa14.84□□□□□ -0.03
SMC1A-204ENST00000463684 YWHAZP63104 245 aaKnown RBP14.84□□□□□ -0.03
SMC1A-204ENST00000463684 KRT83P78385 493 aa14.84□□□□□ -0.03
SMC1A-204ENST00000463684 FKBP3Q00688 224 aaKnown RBP14.84□□□□□ -0.03
SMC1A-204ENST00000463684 ARL13BQ3SXY8 428 aa14.84□□□□□ -0.03
SMC1A-204ENST00000463684 GCNT7Q6ZNI0 430 aa14.84□□□□□ -0.03
SMC1A-204ENST00000463684 EFL1Q7Z2Z2 1120 aaKnown RBP14.84□□□□□ -0.03
SMC1A-204ENST00000463684 SMYD4Q8IYR2 804 aaPredicted RBP14.84□□□□□ -0.03
SMC1A-204ENST00000463684 ATP11CQ8NB49 1132 aa14.84□□□□□ -0.03
SMC1A-204ENST00000463684 TMIEQ8NEW7 156 aa14.84□□□□□ -0.03
SMC1A-204ENST00000463684 WDR36Q8NI36 951 aaKnown RBP14.84□□□□□ -0.03
SMC1A-204ENST00000463684 ARRDC3Q96B67 414 aa14.84□□□□□ -0.03
SMC1A-204ENST00000463684 ALG14Q96F25 216 aa14.84□□□□□ -0.03
SMC1A-204ENST00000463684 MED15Q96RN5 788 aa14.84□□□□□ -0.03
SMC1A-204ENST00000463684 CCNL2Q96S94 520 aaPredicted RBP14.84□□□□□ -0.03
SMC1A-204ENST00000463684 CAAP1Q9H8G2 361 aa14.84□□□□□ -0.03
SMC1A-204ENST00000463684 CSNK1G3Q9Y6M4 447 aa14.84□□□□□ -0.03
SMC1A-204ENST00000463684 A0A1W2PNU3 283 aaPredicted RBP14.83□□□□□ -0.04
SMC1A-204ENST00000463684 CDRT15L2A8MXV6 281 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 TCEA3O75764 348 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 TNFSF15O95150 251 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 CALCAP01258 141 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 CSF2P04141 144 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 PRNPP04156 253 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 CCR1P32246 355 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 MLLT3P42568 568 aaPredicted RBP14.83□□□□□ -0.04
SMC1A-204ENST00000463684 RPL34P49207 117 aaKnown RBP14.83□□□□□ -0.04
SMC1A-204ENST00000463684 CETN1Q12798 172 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 MAPK8IP2Q13387 824 aaPredicted RBP14.83□□□□□ -0.04
SMC1A-204ENST00000463684 NR0B2Q15466 257 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 OR6B2Q6IFH4 312 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 FBXL22Q6P050 247 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 GUSBP11Q6P575 273 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 XKR5Q6UX68 686 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 KRBA2Q6ZNG9 492 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 ERN2Q76MJ5 926 aaKnown RBP14.83□□□□□ -0.04
SMC1A-204ENST00000463684 ZNF548Q8NEK5 533 aaPredicted RBP14.83□□□□□ -0.04
SMC1A-204ENST00000463684 GLMNQ92990 594 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 SLC35C1Q96A29 364 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 PRR11Q96HE9 360 aaPredicted RBP14.83□□□□□ -0.04
SMC1A-204ENST00000463684 SPATA32Q96LK8 384 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 IL12RB2Q99665 862 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 ARHGAP9Q9BRR9 750 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 MUC3BQ9H195 1237 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 THAP9Q9H5L6 903 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 FAM204AQ9H8W3 233 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 SALL4Q9UJQ4 1053 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 ZFR2Q9UPR6 939 aaKnown RBP14.83□□□□□ -0.04
SMC1A-204ENST00000463684 COL6A6A6NMZ7 2263 aa14.83□□□□□ -0.04
SMC1A-204ENST00000463684 SYNJ2BP-COX16A0A087WUM0 186 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 SPTY2D1-AS1A0A0U1RR47 76 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 EME2A4GXA9 379 aaPredicted RBP14.82□□□□□ -0.04
SMC1A-204ENST00000463684 AQP9O43315 295 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 CLDN11O75508 207 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 GJB6O95452 261 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 IGLV3-25P01717 112 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 CTSLP07711 333 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 SRCP12931 536 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 NME1P15531 152 aaKnown RBP14.82□□□□□ -0.04
SMC1A-204ENST00000463684 RPIAP49247 311 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 FMO5P49326 533 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 CDK17Q00537 523 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 CENPCQ03188 943 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 CLN3Q13286 438 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 MTA1Q13330 715 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 AUHQ13825 339 aaKnown RBP14.82□□□□□ -0.04
SMC1A-204ENST00000463684 FZD2Q14332 565 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 SEL1L3Q68CR1 1132 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 PARGQ86W56 976 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 OR2A12Q8NGT7 310 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 WDR48Q8TAF3 677 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 LMX1AQ8TE12 382 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 STK32AQ8WU08 396 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 CCDC34Q96HJ3 373 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 PPP1R16AQ96I34 528 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 FEM1CQ96JP0 617 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 BMFQ96LC9 184 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 SRRTQ9BXP5 876 aaKnown RBP14.82□□□□□ -0.04
SMC1A-204ENST00000463684 HDAC8Q9BY41 377 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 SLC17A9Q9BYT1 436 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 DDIT4Q9NX09 232 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 COX16Q9P0S2 106 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 HS3ST2Q9Y278 367 aa14.82□□□□□ -0.04
SMC1A-204ENST00000463684 OR51B4Q9Y5P0 310 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms