RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 KRT71Q3SY84 523 aa19.38■□□□□ 0.69
CCDC78-206ENST00000463539 CXorf57Q6NSI4 855 aaKnown RBP19.38■□□□□ 0.69
CCDC78-206ENST00000463539 CARNMT1Q8N4J0 409 aa19.38■□□□□ 0.69
CCDC78-206ENST00000463539 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.38■□□□□ 0.69
CCDC78-206ENST00000463539 OR52K2Q8NGK3 314 aa19.38■□□□□ 0.69
CCDC78-206ENST00000463539 ING5Q8WYH8 240 aa19.38■□□□□ 0.69
CCDC78-206ENST00000463539 PPP1R2P1Q96PQ5 205 aa19.38■□□□□ 0.69
CCDC78-206ENST00000463539 SPON2Q9BUD6 331 aa19.38■□□□□ 0.69
CCDC78-206ENST00000463539 MLPHQ9BV36 600 aaPredicted RBP19.38■□□□□ 0.69
CCDC78-206ENST00000463539 VPS37BQ9H9H4 285 aa19.38■□□□□ 0.69
CCDC78-206ENST00000463539 CHMP2BQ9UQN3 213 aa19.38■□□□□ 0.69
CCDC78-206ENST00000463539 DOCK4Q8N1I0 1966 aa19.38■□□□□ 0.69
CCDC78-206ENST00000463539 CACNG3O60359 315 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 LUC7L3O95232 432 aaKnown RBP19.37■□□□□ 0.69
CCDC78-206ENST00000463539 PRAMEF12O95522 483 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 ETFBP38117 255 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 ELK3P41970 407 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 OXCT1P55809 520 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 SLC10A7Q0GE19 358 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 CDH18Q13634 790 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 LRRC8BQ6P9F7 803 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 CAPN12Q6ZSI9 719 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 DDI1Q8WTU0 396 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 FCRL5Q96RD9 977 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 MUC3BQ9H195 1237 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 IGFLR1Q9H665 355 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 ATP13A1Q9HD20 1204 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 AAR2Q9Y312 384 aaKnown RBP19.37■□□□□ 0.69
CCDC78-206ENST00000463539 TEX264Q9Y6I9 313 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 A0A087WUV0 522 aaPredicted RBP19.37■□□□□ 0.69
CCDC78-206ENST00000463539 GOLGA8KD6RF30 607 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 RNF40O75150 1001 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 SUN1O94901 812 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 PAPLNO95428 1278 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 HOXD9P28356 352 aaPredicted RBP19.37■□□□□ 0.69
CCDC78-206ENST00000463539 MMP13P45452 471 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 IFNAR2P48551 515 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 NUMBP49757 651 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 SPARCL1Q14515 664 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 MPPE1Q53F39 396 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 TMCO4Q5TGY1 634 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 RNF219Q5W0B1 726 aaPredicted RBP19.37■□□□□ 0.69
CCDC78-206ENST00000463539 KCTD11Q693B1 232 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 ZNF783Q6ZMS7 281 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 PALM2Q8IXS6 379 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 TEX26Q8N6G2 289 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 BHMTQ93088 406 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 LRRC39Q96DD0 335 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 OXNAD1Q96HP4 312 aaPredicted RBP19.37■□□□□ 0.69
CCDC78-206ENST00000463539 ZSWIM3Q96MP5 696 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 ZNF599Q96NL3 588 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 CENPHQ9H3R5 247 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 LRRC40Q9H9A6 602 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 PDFQ9HBH1 243 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 UBP1Q9NZI7 540 aa19.37■□□□□ 0.69
CCDC78-206ENST00000463539 ANXA9O76027 345 aa19.36■□□□□ 0.69
CCDC78-206ENST00000463539 TSHRP16473 764 aa19.36■□□□□ 0.69
CCDC78-206ENST00000463539 PHBP35232 272 aa19.36■□□□□ 0.69
CCDC78-206ENST00000463539 LBRQ14739 615 aaKnown RBP19.36■□□□□ 0.69
CCDC78-206ENST00000463539 LEKR1Q6ZMV7 388 aa19.36■□□□□ 0.69
CCDC78-206ENST00000463539 CROCCP2Q86T23 111 aa19.36■□□□□ 0.69
CCDC78-206ENST00000463539 IGDCC3Q8IVU1 814 aa19.36■□□□□ 0.69
CCDC78-206ENST00000463539 AGGF1Q8N302 714 aaeCLIP19.36■□□□□ 0.69
CCDC78-206ENST00000463539 ITFG1Q8TB96 612 aa19.36■□□□□ 0.69
CCDC78-206ENST00000463539 NUP205Q92621 2012 aa19.36■□□□□ 0.69
CCDC78-206ENST00000463539 PKNOX2Q96KN3 472 aa19.36■□□□□ 0.69
CCDC78-206ENST00000463539 NT5MQ9NPB1 228 aa19.36■□□□□ 0.69
CCDC78-206ENST00000463539 NYNRINQ9P2P1 1898 aaKnown RBP19.36■□□□□ 0.69
CCDC78-206ENST00000463539 PSMD3O43242 534 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 KDELR3O43731 214 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 CPP00450 1065 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 TNK2Q07912 1038 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 CBX2Q14781 532 aaPredicted RBP19.35■□□□□ 0.69
CCDC78-206ENST00000463539 MPP7Q5T2T1 576 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 TPGS1Q6ZTW0 290 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 MFN1Q8IWA4 741 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 SPATA22Q8NHS9 363 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 RIN3Q8TB24 985 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 ARL8AQ96BM9 186 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 CCDC77Q9BR77 488 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 TMEM109Q9BVC6 243 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 TMBIM4Q9HC24 238 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.35■□□□□ 0.69
CCDC78-206ENST00000463539 SMIM23A6NLE4 172 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 CYBBP04839 570 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 IVLP07476 585 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 GPX6P59796 221 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 ITKQ08881 620 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 ZNF235Q14590 738 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 STAT4Q14765 748 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 ZNF77Q15935 545 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 TTMPQ5BVD1 217 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 FSCBQ5H9T9 825 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 RARS2Q5T160 578 aaKnown RBP19.35■□□□□ 0.69
CCDC78-206ENST00000463539 C3orf62Q6ZUJ4 267 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 ARID3BQ8IVW6 561 aaPredicted RBP19.35■□□□□ 0.69
CCDC78-206ENST00000463539 CCDC117Q8IWD4 279 aaPredicted RBP19.35■□□□□ 0.69
CCDC78-206ENST00000463539 KLHDC8BQ8IXV7 354 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 EPS8L3Q8TE67 593 aaKnown RBP19.35■□□□□ 0.69
CCDC78-206ENST00000463539 ACE2Q9BYF1 805 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms