RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	ACTL7A	Q9Y615	435 aa		9.83	□□□□□ -0.84
PSMD4-208	ENST00000462970	SPTBN4	Q9H254	2564 aa		9.83	□□□□□ -0.84
PSMD4-208	ENST00000462970	ATXN2	Q99700	1313 aa	Known RBP	9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	EIF3CL	B5ME19	914 aa	Known RBP	9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	RASA4B	C9J798	803 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	DFFA	O00273	331 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	PLK4	O00444	970 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	MID1	O15344	667 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	RASA4	O43374	803 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	SMAD6	O43541	496 aa	Known RBP	9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	ATP9B	O43861	1147 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	RNASEH2A	O75792	299 aa	Known RBP	9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	PROSC	O94903	275 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	EPN2	O95208	641 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	RARA	P10276	462 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	CDC25B	P30305	580 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	OXTR	P30559	389 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	SLC8A1	P32418	973 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	PTGER3	P43115	390 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	CDH6	P55285	790 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	SEMA3B	Q13214	749 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	ELAVL3	Q14576	367 aa	Known RBP	9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	CST6	Q15828	149 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	BOLA3	Q53S33	107 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	ARTN	Q5T4W7	220 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	LYSMD4	Q5XG99	296 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	TXNRD3NB	Q6F5E7	133 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	C22orf39	Q6P5X5	142 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	RFX8	Q6ZV50	586 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	RGL4	Q8IZJ4	473 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	NIPA2	Q8N8Q9	360 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	KCTD6	Q8NC69	237 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	GRIN3A	Q8TCU5	1115 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	RFFL	Q8WZ73	363 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	PTPRN2	Q92932	1015 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	HMCES	Q96FZ2	354 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	ZC3H10	Q96K80	434 aa	Known RBP	9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	CCDC114	Q96M63	670 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	HSPA12B	Q96MM6	686 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	EIF3C	Q99613	913 aa	Known RBP	9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	CALN1	Q9BXU9	219 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	TM6SF2	Q9BZW4	377 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	RSPH9	Q9H1X1	276 aa	Predicted RBP	9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	PABPC3	Q9H361	631 aa	Known RBP	9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	ITM2C	Q9NQX7	267 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	FBXL12	Q9NXK8	326 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	CWC15	Q9P013	229 aa	Known RBP	9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	TFR2	Q9UP52	801 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	FCF1	Q9Y324	198 aa	Known RBP	9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	MYO15A	Q9UKN7	3530 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	ADAMTS9	Q9P2N4	1935 aa		9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	TNRC6B	Q9UPQ9	1833 aa	Known RBP	9.82	□□□□□ -0.84
PSMD4-208	ENST00000462970	USP34	Q70CQ2	3546 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	DMD	P11532	3685 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970		A0A1W2PP55	124 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	KPNA3	O00505	521 aa	Predicted RBP	9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	KDELR3	O43731	214 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	ADH1B	P00325	375 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	CFI	P05156	583 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	ERCC2	P18074	760 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	AMPD1	P23109	780 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	ITPKA	P23677	461 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	HTR7	P34969	479 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	MPL	P40238	635 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	SERPINH1	P50454	418 aa	Known RBP	9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	NAP1L1	P55209	391 aa	Known RBP	9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	GEMIN4	P57678	1058 aa	Known RBP	9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	TAS2R40	P59535	323 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	SFSWAP	Q12872	951 aa	Known RBP	9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	ATP13A4	Q4VNC1	1196 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	ODF2	Q5BJF6	829 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	TMCO3	Q6UWJ1	677 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	KIAA1328	Q86T90	577 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	TMTC1	Q8IUR5	882 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	PSTK	Q8IV42	348 aa	Known RBP	9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	RHOT2	Q8IXI1	618 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	CCDC170	Q8IYT3	715 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	HDDC3	Q8N4P3	179 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	C12orf50	Q8NA57	414 aa	Predicted RBP	9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	CHST14	Q8NCH0	376 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	FRS2	Q8WU20	508 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	TEKT4	Q8WW24	435 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	LOXL4	Q96JB6	756 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	FAM129B	Q96TA1	746 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	BAG1	Q99933	345 aa	Predicted RBP	9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	ACE2	Q9BYF1	805 aa	Predicted RBP	9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	KLC2	Q9H0B6	622 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	MIR1-1HG	Q9H1L0	117 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	RETREG1	Q9H6L5	497 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	NOL6	Q9H6R4	1146 aa	Known RBP	9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	ZDHHC6	Q9H6R6	413 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	PCDH18	Q9HCL0	1135 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	PARD6A	Q9NPB6	346 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	DONSON	Q9NYP3	566 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	USP36	Q9P275	1121 aa	Known RBP	9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	HS3ST2	Q9Y278	367 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	MFHAS1	Q9Y4C4	1052 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	HYOU1	Q9Y4L1	999 aa		9.81	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms