RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 TRIM21P19474 475 aaKnown RBP6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 CR2P20023 1033 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 DDX6P26196 483 aaKnown RBP eCLIP6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 KIR2DL1P43626 348 aaPredicted RBP6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 ASPAP45381 313 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 SLC6A11P48066 632 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 LHX1P48742 406 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 TUFMP49411 452 aaKnown RBP6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 CDR1P51861 262 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 UCNP55089 124 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 RIPPLY3P57055 190 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 TSPY1Q01534 308 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 BNC1Q01954 994 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 CAMK2GQ13555 558 aaPredicted RBP6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 ZNF268Q14587 947 aaPredicted RBP6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 VEPH1Q14D04 833 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 KRT31Q15323 416 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 DDR2Q16832 855 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 SOWAHAQ2M3V2 549 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 CCDC38Q502W7 563 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 FKBP15Q5T1M5 1219 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 IL27RAQ6UWB1 636 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 SCARA5Q6ZMJ2 495 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 ATG14Q6ZNE5 492 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 MON1AQ86VX9 555 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 TMEM139Q8IV31 216 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 ADGRF2Q8IZF7 708 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 TMEM86AQ8N2M4 240 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 GOLM1Q8NBJ4 401 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 OR6B3Q8NGW1 331 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 CABS1Q96KC9 395 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 NT5C1BQ96P26 610 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 PLEKHG4BQ96PX9 1271 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 CYP2S1Q96SQ9 504 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 INSM2Q96T92 566 aaPredicted RBP6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 DNAJC7Q99615 494 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 MRPL45Q9BRJ2 306 aaKnown RBP6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 DNAI2Q9GZS0 605 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 INTS2Q9H0H0 1204 aaKnown RBP6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 MIR1-1HGQ9H1L0 117 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 SNX25Q9H3E2 840 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 NDST4Q9H3R1 872 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 RMI1Q9H9A7 625 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 TRMT1Q9NXH9 659 aaKnown RBP6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 DDX43Q9NXZ2 648 aaKnown RBP6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 GCNT4Q9P109 453 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 ITGB1BP2Q9UKP3 347 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 RAB21Q9UL25 225 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 BLOC1S6Q9UL45 172 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 L1RE1Q9UN81 338 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 CYP8B1Q9UNU6 501 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 COQ4Q9Y3A0 265 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 TMEM131Q92545 1883 aa6.22□□□□□ -1.41
SMARCC1-204ENST00000462198 SPTBN1Q01082 2364 aaKnown RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 ESYT3A0FGR9 886 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 GTPBP10A4D1E9 387 aaKnown RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 CCDC151A5D8V7 595 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 OR6C75A6NL08 312 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 TTLL8A6PVC2 850 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 A8MXQ7 604 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 ENC1O14682 589 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 PMM2O15305 246 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 KIF5CO60282 957 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 TACC1O75410 805 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 KAT7O95251 611 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 SERPINC1P01008 464 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 APODP05090 189 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 PDGFRBP09619 1106 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 FAM163BP0C2L3 166 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 VDRP11473 427 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 ATP1A3P13637 1013 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 CD58P19256 250 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 TFE3P19532 575 aaPredicted RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 WARSP23381 471 aaKnown RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 TBXAS1P24557 533 aaPredicted RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 ACAT1P24752 427 aaKnown RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 PON1P27169 355 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 PCSK1P29120 753 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 GNL1P36915 607 aaPredicted RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 TNFRSF4P43489 277 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 GIPRP48546 466 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 COPB1P53618 953 aaKnown RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 CDH8P55286 799 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 YWHAEP62258 255 aaKnown RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 RPS26P62854 115 aaKnown RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 NFKB2Q00653 900 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 UBXN1Q04323 297 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 DEUP1Q05D60 604 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 MESP2Q0VG99 397 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 TBX2Q13207 712 aaPredicted RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 SQSTM1Q13501 440 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 TUBB2AQ13885 445 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 BRD3Q15059 726 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 DBN1Q16643 649 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 EXOC3L4Q17RC7 722 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 GAB4Q2WGN9 574 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 TBC1D25Q3MII6 688 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 MGAT5BQ3V5L5 792 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 MIIPQ5JXC2 388 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms