RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 OVGP1Q12889 678 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 SGCGQ13326 291 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 KLHL40Q2TBA0 621 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 C5orf22Q49AR2 442 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 ALFQ53S48 1182 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 CFAP58Q5T655 872 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 CDKAL1Q5VV42 579 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 NAPEPLDQ6IQ20 393 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 LINGO4Q6UY18 593 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 STRADAQ7RTN6 431 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 SLFN11Q7Z7L1 901 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 AADATQ8N5Z0 425 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 EMC1Q8N766 993 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 PNPLA1Q8N8W4 532 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 MFSD2AQ8NA29 543 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 TMIEQ8NEW7 156 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 GRIN3AQ8TCU5 1115 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 FAM172AQ8WUF8 416 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 SLC20A1Q8WUM9 679 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 ZCCHC14Q8WYQ9 949 aaKnown RBP9.07□□□□□ -0.96
LDB1-203ENST00000461873 NT5C3BQ969T7 300 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 TBC1D31Q96DN5 1066 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 KLHDC7BQ96G42 594 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 AGPAT1Q99943 283 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 CEP44Q9C0F1 390 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 CATSPERBQ9H7T0 1116 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 PPARGC1AQ9UBK2 798 aaKnown RBP9.07□□□□□ -0.96
LDB1-203ENST00000461873 IPO11Q9UI26 975 aaKnown RBP9.07□□□□□ -0.96
LDB1-203ENST00000461873 VPS51Q9UID3 782 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 PPM1HQ9ULR3 514 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 HS3ST2Q9Y278 367 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 SNX10Q9Y5X0 201 aa9.07□□□□□ -0.96
LDB1-203ENST00000461873 CACNA1EQ15878 2313 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 NCOR2Q9Y618 2525 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 ZSCAN5CA6NGD5 496 aaPredicted RBP9.06□□□□□ -0.96
LDB1-203ENST00000461873 DRGXA6NNA5 263 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 H0Y8X5 98 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 DAPK3O43293 454 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 PLRG1O43660 514 aaKnown RBP9.06□□□□□ -0.96
LDB1-203ENST00000461873 PCDHGA12O60330 932 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 SNAP91O60641 907 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 RAMP2O60895 175 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 GJB3O75712 270 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 CYP1A1P04798 512 aaPredicted RBP9.06□□□□□ -0.96
LDB1-203ENST00000461873 IGHV4-34P06331 123 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 VAV1P15498 845 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 RRM1P23921 792 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 ADRA1BP35368 520 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 HNF1BP35680 557 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 MAPKAPK2P49137 400 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 KLK7P49862 253 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 SNRPD1P62314 119 aaKnown RBP9.06□□□□□ -0.96
LDB1-203ENST00000461873 FMO1Q01740 532 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 GNA12Q03113 381 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 TYRO3Q06418 890 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 CNTN1Q12860 1018 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 C15orf59Q2T9L4 293 aaPredicted RBP9.06□□□□□ -0.96
LDB1-203ENST00000461873 CARD16Q5EG05 197 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 ARSIQ5FYB1 569 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 NEK5Q6P3R8 708 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 C22orf39Q6P5X5 142 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 LAYNQ6UX15 382 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 ERN2Q76MJ5 926 aaKnown RBP9.06□□□□□ -0.96
LDB1-203ENST00000461873 GLRX5Q86SX6 157 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 VPS36Q86VN1 386 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 IQCHQ86VS3 1027 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 AOPEPQ8N6M6 819 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 PCDH20Q8N6Y1 951 aaKnown RBP9.06□□□□□ -0.96
LDB1-203ENST00000461873 FAM174AQ8TBP5 190 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 FRS2Q8WU20 508 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 ADAMTS14Q8WXS8 1223 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 ARHGEF26Q96DR7 871 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 FEM1CQ96JP0 617 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 EPAS1Q99814 870 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 NCAPGQ9BPX3 1015 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 HEPHQ9BQS7 1158 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 GANQ9H2C0 597 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 TNKS2Q9H2K2 1166 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 ZDHHC6Q9H6R6 413 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 SERGEFQ9UGK8 458 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 DNAI1Q9UI46 699 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 TMEM59LQ9UK28 342 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 KLK13Q9UKR3 277 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 ZMIZ1Q9ULJ6 1067 aa9.06□□□□□ -0.96
LDB1-203ENST00000461873 MUC22E2RYF6 1773 aaPredicted RBP9.06□□□□□ -0.96
LDB1-203ENST00000461873 TPRP12270 2363 aaKnown RBP9.05□□□□□ -0.96
LDB1-203ENST00000461873 TMEM131Q92545 1883 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 NYNRINQ9P2P1 1898 aaKnown RBP9.05□□□□□ -0.96
LDB1-203ENST00000461873 A0A0D9SEW6 157 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 A0A1B0GTQ1 180 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 A0A1W2PQU0 124 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 SIGLEC16A6NMB1 481 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 GOLGA6L19H0YKK7 550 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 PLK4O00444 970 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 SLC31A1O15431 190 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 BUB1O43683 1085 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 CREB3O43889 395 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 RNF8O76064 485 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 PLEKP08567 350 aaPredicted RBP9.05□□□□□ -0.96
LDB1-203ENST00000461873 C7P10643 843 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms