RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 TBL1YQ9BQ87 522 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 TMEM109Q9BVC6 243 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 IL22Q9GZX6 179 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 ACSS3Q9H6R3 686 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 LRRC4CQ9HCJ2 640 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 SCUBE2Q9NQ36 999 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 VPS45Q9NRW7 570 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 OSER1Q9NX31 292 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 NSMCE4AQ9NXX6 385 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 LZTS1Q9Y250 596 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 ZFP37Q9Y6Q3 630 aaPredicted RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 MYO9BQ13459 2157 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 RALGAPA2Q2PPJ7 1873 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 TCRBV7S3A2A0A539 114 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 TMEM120BA0PK00 339 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 FAM47DPA6NHR8 397 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 TRIM49D1C9J1S8 452 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 AGPSO00116 658 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 SPAG7O75391 227 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 STC2O76061 302 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 CNTN5O94779 1100 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 CA3P07451 260 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 GJA1P17302 382 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 TPH1P17752 444 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 ALDH3A1P30838 453 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 MDH1P40925 334 aaKnown RBP4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 CD86P42081 329 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 CCT5P48643 541 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 MAXP61244 160 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 CRADDP78560 199 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 GUCY1A3Q02108 690 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 NRG1Q02297 640 aaPredicted RBP4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 KCNJ11Q14654 390 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 ZKSCAN8Q15776 578 aaPredicted RBP4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 KBTBD12Q3ZCT8 623 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 MPPE1Q53F39 396 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 ALFQ53S48 1182 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 TTMPQ5BVD1 217 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 SPANXN3Q5MJ09 141 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 FNBP1LQ5T0N5 605 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 FYB2Q5VWT5 728 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 PDE12Q6L8Q7 609 aaKnown RBP4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 LRRC8BQ6P9F7 803 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 OTOP3Q7RTS5 596 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 UMODL1-AS1Q8N2C9 162 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 MRPL43Q8N983 215 aaKnown RBP4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 GDAP1Q8TB36 358 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 BLOC1S5Q8TDH9 187 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 ZNF689Q96CS4 500 aaPredicted RBP4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 SLC39A13Q96H72 371 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 VPS39Q96JC1 886 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 TSGA13Q96PP4 275 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 XPO6Q96QU8 1125 aaKnown RBP4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 SH3GL2Q99962 352 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 C17orf80Q9BSJ5 609 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 PRKD2Q9BZL6 878 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 SLC25A51Q9H1U9 297 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 ADAM7Q9H2U9 754 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 IGFLR1Q9H665 355 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 RXFP1Q9HBX9 757 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 MLXIPLQ9NP71 852 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 TMEM248Q9NWD8 314 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 PPARGC1AQ9UBK2 798 aaKnown RBP4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 ZMYM5Q9UJ78 669 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 FARP1Q9Y4F1 1045 aaPredicted RBP4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 MYO7AQ13402 2215 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 TCRBV9S1A1TA0A576 114 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 LINC01553A4QN01 128 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 C2orf78A6NCI8 922 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 GOLGA8RI6L899 631 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 IGLV3-25P01717 112 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 HNRNPA1P09651 372 aaKnown RBP eCLIP4.19□□□□□ -1.742e-6■□□□□ 8.3
ATP13A3-206ENST00000461660 DDX6P26196 483 aaKnown RBP eCLIP4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 TYK2P29597 1187 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 SPRP35270 261 aaPredicted RBP4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 KPNA2P52292 529 aaKnown RBP4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 ST8SIA6P61647 398 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 IFI35P80217 286 aaPredicted RBP4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 WASHC5Q12768 1159 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 SEMA3BQ13214 749 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 MPP3Q13368 585 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 LBRQ14739 615 aaKnown RBP4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 LRRC14Q15048 493 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 RNF187Q5TA31 235 aaPredicted RBP4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 GKAP1Q5VSY0 366 aaPredicted RBP4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 BHLHA9Q7RTU4 235 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 TRIM42Q8IWZ5 723 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 TET1Q8NFU7 2136 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 CALML6Q8TD86 181 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 SH3RF2Q8TEC5 729 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 PTPRN2Q92932 1015 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 MTBPQ96DY7 904 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 ATXN7L3BQ96GX2 97 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 SGSM3Q96HU1 749 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 SCYL1Q96KG9 808 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 MYRFLQ96LU7 910 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 CYP2S1Q96SQ9 504 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 TTC1Q99614 292 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 VPS11Q9H270 941 aa4.19□□□□□ -1.74
ATP13A3-206ENST00000461660 TASP1Q9H6P5 420 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms