RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 B4GALNT4Q76KP1 1039 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 CYB5R4Q7L1T6 521 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 MDGA2Q7Z553 956 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 IGFN1Q86VF2 1251 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 MON1AQ86VX9 555 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 RHPN2Q8IUC4 686 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 DIS3L2Q8IYB7 885 aaKnown RBP3.28□□□□□ -1.88
HDAC6-212ENST00000461608 FAM185AQ8N0U4 392 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 GHDCQ8N2G8 530 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 EXD3Q8N9H8 876 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 SCAIQ8N9R8 606 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 NEK9Q8TD19 979 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 FAM149B1Q96BN6 582 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 KLHL29Q96CT2 875 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 KIF1BPQ96EK5 621 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 CCDC34Q96HJ3 373 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 RITA1Q96K30 269 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 ADAD1Q96M93 576 aaKnown RBP3.28□□□□□ -1.88
HDAC6-212ENST00000461608 NR1H4Q96RI1 486 aaPredicted RBP3.28□□□□□ -1.88
HDAC6-212ENST00000461608 CHCHD6Q9BRQ6 235 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 GATA5Q9BWX5 397 aaPredicted RBP3.28□□□□□ -1.88
HDAC6-212ENST00000461608 TMX4Q9H1E5 349 aaPredicted RBP3.28□□□□□ -1.88
HDAC6-212ENST00000461608 RANBP17Q9H2T7 1088 aaKnown RBP3.28□□□□□ -1.88
HDAC6-212ENST00000461608 Q9N2J8 555 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 ARPP21Q9UBL0 812 aaPredicted RBP3.28□□□□□ -1.88
HDAC6-212ENST00000461608 SERGEFQ9UGK8 458 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 CLDN16Q9Y5I7 305 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 FSD2A1L4K1 749 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 GTPBP1O00178 669 aaKnown RBP3.27□□□□□ -1.89
HDAC6-212ENST00000461608 MSI1O43347 362 aaKnown RBP3.27□□□□□ -1.89
HDAC6-212ENST00000461608 TNFSF14O43557 240 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 PLAUP00749 431 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 HOXB5P09067 269 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 IRF1P10914 325 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 CYP2A6P11509 494 aaPredicted RBP3.27□□□□□ -1.89
HDAC6-212ENST00000461608 LYL1P12980 280 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 LAMP2P13473 410 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 POU1F1P28069 291 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 PTGER1P34995 402 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 IDUAP35475 653 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 GGT5P36269 586 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 GABRB2P47870 512 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 CYP2J2P51589 502 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 YWHAZP63104 245 aaKnown RBP3.27□□□□□ -1.89
HDAC6-212ENST00000461608 SETQ01105 290 aaPredicted RBP3.27□□□□□ -1.89
HDAC6-212ENST00000461608 GOLGA8DPQ0D2H9 430 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 NEXNQ0ZGT2 675 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 MTA1Q13330 715 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 MAMLD1Q13495 774 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 KRT32Q14532 448 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 SLC18A3Q16572 532 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 PROSER3Q2NL68 480 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 PLK5Q496M5 336 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 ISM2Q6H9L7 571 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 NCAPH2Q6IBW4 605 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 CFAP161Q6P656 301 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 TMEM81Q6P7N7 255 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 IL20RBQ6UXL0 311 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 UBE2Q1Q7Z7E8 422 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 AMIGO2Q86SJ2 522 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 CHD1LQ86WJ1 897 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 NGEFQ8N5V2 710 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 PNLDC1Q8NA58 520 aaKnown RBP3.27□□□□□ -1.89
HDAC6-212ENST00000461608 OSR1Q8TAX0 266 aaPredicted RBP3.27□□□□□ -1.89
HDAC6-212ENST00000461608 METTL6Q8TCB7 284 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 WIPF2Q8TF74 440 aaPredicted RBP3.27□□□□□ -1.89
HDAC6-212ENST00000461608 NTN5Q8WTR8 489 aaPredicted RBP3.27□□□□□ -1.89
HDAC6-212ENST00000461608 HDAC7Q8WUI4 952 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 RUFY2Q8WXA3 655 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 CUL5Q93034 780 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 ZNF347Q96SE7 839 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 FAM118BQ9BPY3 351 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.27□□□□□ -1.89
HDAC6-212ENST00000461608 SEMA4CQ9C0C4 833 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.27□□□□□ -1.89
HDAC6-212ENST00000461608 LMAN2LQ9H0V9 348 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 SLC25A18Q9H1K4 315 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 KLK15Q9H2R5 256 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 MUC13Q9H3R2 512 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 SYNCQ9H7C4 482 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 PLEKHA5Q9HAU0 1116 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 IL21RQ9HBE5 538 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 SEMA4BQ9NPR2 832 aaPredicted RBP3.27□□□□□ -1.89
HDAC6-212ENST00000461608 RNF146Q9NTX7 359 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 ASB6Q9NWX5 421 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 GRHL1Q9NZI5 618 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 IL1RAPL1Q9NZN1 696 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 CDH22Q9UJ99 828 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 ADAM21Q9UKJ8 722 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 KAT6AQ92794 2004 aa3.27□□□□□ -1.89
HDAC6-212ENST00000461608 TEX13CA0A0J9YWL9 993 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 ARHGAP10A1A4S6 786 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 DPPA5A6NC42 116 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 F8W810 466 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 RRHO14718 337 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 TIPRLO75663 272 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 ADAP00813 363 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 SERPINC1P01008 464 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 CYP2D6P10635 497 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 FCGR2AP12318 317 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms