RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 WSB2Q9NYS7 404 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 INTUQ9ULD6 942 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 VPS13AQ96RL7 3174 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 SDK1Q7Z5N4 2213 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 A0A1W2PP55 124 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 BCLAF3A2AJT9 711 aaKnown RBP10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 ZSCAN5CA6NGD5 496 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 MEI4A8MW99 385 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 RASA4BC9J798 803 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 C1QTNF3-AMACRE9PGA6 284 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 K7ERQ8 282 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 ALOX15BO15296 676 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 RASA4O43374 803 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 SMAD6O43541 496 aaKnown RBP10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 BUB1O43683 1085 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 KDELR3O43731 214 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 IGLV3-19P01714 112 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 RARAP10276 462 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 TCF4P15884 667 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 ERCC2P18074 760 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 C5AR1P21730 350 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 CDC25BP30305 580 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 GJC1P36383 396 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 MPLP40238 635 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 DPP6P42658 865 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 HCAR3P49019 387 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 SERPINH1P50454 418 aaKnown RBP10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 DNA2P51530 1060 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 ARF5P84085 180 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 SLC25A11Q02978 314 aaKnown RBP10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 ZNF33AQ06730 810 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 MESDQ14696 234 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 SPA17Q15506 151 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 CCDC6Q16204 474 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 CSRP2Q16527 193 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 PARP15Q460N3 678 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 ZFYVE27Q5T4F4 411 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 SYCP2LQ5T4T6 812 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 FAM46CQ5VWP2 391 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 C22orf39Q6P5X5 142 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 RFX8Q6ZV50 586 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 CYP4V2Q6ZWL3 525 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 USP30Q70CQ3 517 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 TMTC1Q8IUR5 882 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 RGL4Q8IZJ4 473 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 HDDC3Q8N4P3 179 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 PCDH20Q8N6Y1 951 aaKnown RBP10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 C12orf50Q8NA57 414 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 SPC24Q8NBT2 197 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 RFFLQ8WZ73 363 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 FOXJ1Q92949 421 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 HSPA12BQ96MM6 686 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 CEP44Q9C0F1 390 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 BTBD1Q9H0C5 482 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 SGK2Q9HBY8 427 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 PARD6AQ9NPB6 346 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 OSGEPQ9NPF4 335 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 VPS45Q9NRW7 570 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 SEMA4GQ9NTN9 838 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 FBXL12Q9NXK8 326 aa10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 TNRC6BQ9UPQ9 1833 aaKnown RBP10.81□□□□□ -0.68
TRAPPC12-213ENST00000461577 USP34Q70CQ2 3546 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 CXorf51AA0A1B0GTR3 108 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 ARHGAP42A6NI28 874 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 MCF2LO15068 1137 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 FOXD2O60548 495 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 RNASEH2AO75792 299 aaKnown RBP10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 IPO7O95373 1038 aaKnown RBP10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 SEMA4FO95754 770 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 C7P10643 843 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 MAN1A1P33908 653 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 ARHGAP25P42331 645 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 PTGER3P43115 390 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 NOP2P46087 812 aaKnown RBP10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 NDST2P52849 883 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 CDH6P55285 790 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 DPYSL2Q16555 572 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 WDR45BQ5MNZ6 344 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 TXNRD3NBQ6F5E7 133 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 LEKR1Q6ZMV7 388 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 PRR23CQ6ZRP0 262 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 UMODL1-AS1Q8N2C9 162 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 CADM4Q8NFZ8 388 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 PIP4K2CQ8TBX8 421 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 HMCESQ96FZ2 354 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 ZNF419Q96HQ0 510 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 CELF6Q96J87 481 aaKnown RBP10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 TNKS2Q9H2K2 1166 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 NOL6Q9H6R4 1146 aaKnown RBP10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 CWC15Q9P013 229 aaKnown RBP10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 IMPACTQ9P2X3 320 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 FCF1Q9Y324 198 aaKnown RBP10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 PCDHA13Q9Y5I0 950 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 ACTL7AQ9Y615 435 aa10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 ZFHX2Q9C0A1 2572 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 ATXN2Q99700 1313 aaKnown RBP10.8□□□□□ -0.68
TRAPPC12-213ENST00000461577 KHNYNO15037 678 aaKnown RBP10.79□□□□□ -0.68
TRAPPC12-213ENST00000461577 MTA2O94776 668 aa10.79□□□□□ -0.68
TRAPPC12-213ENST00000461577 LCA5LO95447 670 aa10.79□□□□□ -0.68
TRAPPC12-213ENST00000461577 PRNPP04156 253 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms