RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 CADM4Q8NFZ8 388 aa18.16■□□□□ 0.5
PLOD3-209ENST00000460475 CEP44Q9C0F1 390 aa18.16■□□□□ 0.5
PLOD3-209ENST00000460475 PABPC3Q9H361 631 aaKnown RBP18.16■□□□□ 0.5
PLOD3-209ENST00000460475 SEMA4GQ9NTN9 838 aa18.16■□□□□ 0.5
PLOD3-209ENST00000460475 CNOT1A5YKK6 2376 aaKnown RBP18.16■□□□□ 0.5
PLOD3-209ENST00000460475 KDELR3O43731 214 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 FOXD2O60548 495 aaPredicted RBP18.15■□□□□ 0.5
PLOD3-209ENST00000460475 ZNF821O75541 412 aaPredicted RBP18.15■□□□□ 0.5
PLOD3-209ENST00000460475 ZNF806P0C7X5 589 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 RARAP10276 462 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 CDC25BP30305 580 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 MPLP40238 635 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 DHPSP49366 369 aaPredicted RBP18.15■□□□□ 0.5
PLOD3-209ENST00000460475 SERPINH1P50454 418 aaKnown RBP18.15■□□□□ 0.5
PLOD3-209ENST00000460475 GEMIN4P57678 1058 aaKnown RBP18.15■□□□□ 0.5
PLOD3-209ENST00000460475 SFSWAPQ12872 951 aaKnown RBP18.15■□□□□ 0.5
PLOD3-209ENST00000460475 PARP15Q460N3 678 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 TTC31Q49AM3 519 aaPredicted RBP18.15■□□□□ 0.5
PLOD3-209ENST00000460475 KCNT1Q5JUK3 1230 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 PEAR1Q5VY43 1037 aaPredicted RBP18.15■□□□□ 0.5
PLOD3-209ENST00000460475 IL31Q6EBC2 164 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 TXNRD3NBQ6F5E7 133 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 LINGO4Q6UY18 593 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 Q6ZVU0 165 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 CACUL1Q86Y37 369 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 MMAAQ8IVH4 418 aaKnown RBP18.15■□□□□ 0.5
PLOD3-209ENST00000460475 SLC41A1Q8IVJ1 513 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 SLC35G2Q8TBE7 412 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 ISG20Q96AZ6 181 aaKnown RBP18.15■□□□□ 0.5
PLOD3-209ENST00000460475 KLC2Q9H0B6 622 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 PCED1AQ9H1Q7 454 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 LRRC19Q9H756 370 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 OSGEPQ9NPF4 335 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 CWC15Q9P013 229 aaKnown RBP18.15■□□□□ 0.5
PLOD3-209ENST00000460475 PPM1HQ9ULR3 514 aa18.15■□□□□ 0.5
PLOD3-209ENST00000460475 ZSCAN5CA6NGD5 496 aaPredicted RBP18.14■□□□□ 0.49
PLOD3-209ENST00000460475 RASA4BC9J798 803 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 RASA4O43374 803 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 NDUFS2O75306 463 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 ADH1BP00325 375 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 GOT1P17174 413 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 C5AR1P21730 350 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 SLC8A1P32418 973 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 MAN1A1P33908 653 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 HOXD12P35452 270 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 DPP6P42658 865 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 NDST2P52849 883 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 CREB5Q02930 508 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 ZNF33AQ06730 810 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 DPYSQ14117 519 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 PPP6R3Q5H9R7 873 aaPredicted RBP18.14■□□□□ 0.49
PLOD3-209ENST00000460475 LYSMD4Q5XG99 296 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 DSG4Q86SJ6 1040 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 RHOT2Q8IXI1 618 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 PLPP6Q8IY26 295 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 OR2A12Q8NGT7 310 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 FAM71BQ8TC56 605 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 OR8D1Q8WZ84 308 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 FOXJ1Q92949 421 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 FAM131CQ96AQ9 280 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 VPS45Q9NRW7 570 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 HPCAL4Q9UM19 191 aa18.14■□□□□ 0.49
PLOD3-209ENST00000460475 MID1O15344 667 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 ERCC2P18074 760 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 ARHGAP25P42331 645 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 SERINC3Q13530 473 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 SMTNL2Q2TAL5 461 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 AFMIDQ63HM1 303 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 C22orf39Q6P5X5 142 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 CYP2U1Q7Z449 544 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 POLNQ7Z5Q5 900 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 TMTC1Q8IUR5 882 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 SYT12Q8IV01 421 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 KIAA2013Q8IYS2 634 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 PCDH20Q8N6Y1 951 aaKnown RBP18.13■□□□□ 0.49
PLOD3-209ENST00000460475 RFFLQ8WZ73 363 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 TSC1Q92574 1164 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 HMCESQ96FZ2 354 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 GPR174Q9BXC1 333 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 ZWILCHQ9H900 591 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 SGK2Q9HBY8 427 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.13■□□□□ 0.49
PLOD3-209ENST00000460475 FBXL12Q9NXK8 326 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 IMPACTQ9P2X3 320 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 PILRBQ9UKJ0 227 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 FZD4Q9ULV1 537 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 NCKAP1Q9Y2A7 1128 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 CACNA1AO00555 2505 aa18.13■□□□□ 0.49
PLOD3-209ENST00000460475 METTL12A8MUP2 240 aa18.12■□□□□ 0.49
PLOD3-209ENST00000460475 C10orf142B7Z368 130 aa18.12■□□□□ 0.49
PLOD3-209ENST00000460475 H3BRJ5 948 aa18.12■□□□□ 0.49
PLOD3-209ENST00000460475 DAPK3O43293 454 aa18.12■□□□□ 0.49
PLOD3-209ENST00000460475 IL1BP01584 269 aa18.12■□□□□ 0.49
PLOD3-209ENST00000460475 ITPKAP23677 461 aa18.12■□□□□ 0.49
PLOD3-209ENST00000460475 ACSL1P33121 698 aa18.12■□□□□ 0.49
PLOD3-209ENST00000460475 ARSEP51690 589 aa18.12■□□□□ 0.49
PLOD3-209ENST00000460475 HADHQ16836 314 aaKnown RBP18.12■□□□□ 0.49
PLOD3-209ENST00000460475 INO80DQ53TQ3 878 aaPredicted RBP18.12■□□□□ 0.49
PLOD3-209ENST00000460475 FAM46CQ5VWP2 391 aa18.12■□□□□ 0.49
PLOD3-209ENST00000460475 PRR23CQ6ZRP0 262 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms