RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 BNIP3LO60238 219 aa23.32■■□□□ 1.32
PTPN4-207ENST00000460162 GFPT2O94808 682 aa23.32■■□□□ 1.32
PTPN4-207ENST00000460162 MT-CO1P00395 513 aa23.32■■□□□ 1.32
PTPN4-207ENST00000460162 CAPNS1P04632 268 aa23.32■■□□□ 1.32
PTPN4-207ENST00000460162 CYP1A1P04798 512 aaPredicted RBP23.32■■□□□ 1.32
PTPN4-207ENST00000460162 ANP32AP39687 249 aaKnown RBP23.32■■□□□ 1.32
PTPN4-207ENST00000460162 CDR2Q01850 454 aa23.32■■□□□ 1.32
PTPN4-207ENST00000460162 SCAPQ12770 1279 aa23.32■■□□□ 1.32
PTPN4-207ENST00000460162 OVGP1Q12889 678 aa23.32■■□□□ 1.32
PTPN4-207ENST00000460162 SETMARQ53H47 684 aaPredicted RBP23.32■■□□□ 1.32
PTPN4-207ENST00000460162 FKBP15Q5T1M5 1219 aa23.32■■□□□ 1.32
PTPN4-207ENST00000460162 C22orf39Q6P5X5 142 aa23.32■■□□□ 1.32
PTPN4-207ENST00000460162 IQCHQ86VS3 1027 aa23.32■■□□□ 1.32
PTPN4-207ENST00000460162 PROSER1Q86XN7 944 aa23.32■■□□□ 1.32
PTPN4-207ENST00000460162 GALNT15Q8N3T1 639 aa23.32■■□□□ 1.32
PTPN4-207ENST00000460162 MFSD2AQ8NA29 543 aa23.32■■□□□ 1.32
PTPN4-207ENST00000460162 OR2A12Q8NGT7 310 aa23.32■■□□□ 1.32
PTPN4-207ENST00000460162 SLC20A1Q8WUM9 679 aa23.32■■□□□ 1.32
PTPN4-207ENST00000460162 VPS16Q9H269 839 aa23.32■■□□□ 1.32
PTPN4-207ENST00000460162 ERVMER34-1Q9H9K5 563 aa23.32■■□□□ 1.32
PTPN4-207ENST00000460162 ZNF212Q9UDV6 495 aa23.32■■□□□ 1.32
PTPN4-207ENST00000460162 A0A0D9SEW6 157 aa23.31■■□□□ 1.32
PTPN4-207ENST00000460162 ILVBLA1L0T0 632 aa23.31■■□□□ 1.32
PTPN4-207ENST00000460162 TLR4O00206 839 aa23.31■■□□□ 1.32
PTPN4-207ENST00000460162 MAGEC1O60732 1142 aa23.31■■□□□ 1.32
PTPN4-207ENST00000460162 CTSLP07711 333 aa23.31■■□□□ 1.32
PTPN4-207ENST00000460162 MMP8P22894 467 aa23.31■■□□□ 1.32
PTPN4-207ENST00000460162 EPHA8P29322 1005 aaPredicted RBP23.31■■□□□ 1.32
PTPN4-207ENST00000460162 SOX5P35711 763 aa23.31■■□□□ 1.32
PTPN4-207ENST00000460162 JAM2P57087 298 aa23.31■■□□□ 1.32
PTPN4-207ENST00000460162 CCDC15Q0P6D6 951 aa23.31■■□□□ 1.32
PTPN4-207ENST00000460162 SHBQ15464 509 aa23.31■■□□□ 1.32
PTPN4-207ENST00000460162 POM121L1PQ3SYA9 428 aa23.31■■□□□ 1.32
PTPN4-207ENST00000460162 TRIM72Q6ZMU5 477 aa23.31■■□□□ 1.32
PTPN4-207ENST00000460162 FAM131BQ86XD5 332 aa23.31■■□□□ 1.32
PTPN4-207ENST00000460162 TMIEQ8NEW7 156 aa23.31■■□□□ 1.32
PTPN4-207ENST00000460162 SAP25Q8TEE9 199 aa23.31■■□□□ 1.32
PTPN4-207ENST00000460162 ZYG11BQ9C0D3 744 aa23.31■■□□□ 1.32
PTPN4-207ENST00000460162 FAM207AQ9NSI2 230 aaPredicted RBP23.31■■□□□ 1.32
PTPN4-207ENST00000460162 PPARGC1AQ9UBK2 798 aaKnown RBP23.31■■□□□ 1.32
PTPN4-207ENST00000460162 CHD5Q8TDI0 1954 aa23.31■■□□□ 1.32
PTPN4-207ENST00000460162 GOLGA8CPA6NN73 597 aa23.3■■□□□ 1.32
PTPN4-207ENST00000460162 K7ERQ8 282 aa23.3■■□□□ 1.32
PTPN4-207ENST00000460162 ENDOD1O94919 500 aa23.3■■□□□ 1.32
PTPN4-207ENST00000460162 PRNPP04156 253 aa23.3■■□□□ 1.32
PTPN4-207ENST00000460162 ITGAVP06756 1048 aa23.3■■□□□ 1.32
PTPN4-207ENST00000460162 RRM1P23921 792 aa23.3■■□□□ 1.32
PTPN4-207ENST00000460162 MAT2AP31153 395 aaKnown RBP23.3■■□□□ 1.32
PTPN4-207ENST00000460162 CHRNA3P32297 505 aa23.3■■□□□ 1.32
PTPN4-207ENST00000460162 KLK7P49862 253 aa23.3■■□□□ 1.32
PTPN4-207ENST00000460162 POLR2FP61218 127 aaKnown RBP23.3■■□□□ 1.32
PTPN4-207ENST00000460162 FMO1Q01740 532 aa23.3■■□□□ 1.32
PTPN4-207ENST00000460162 ARTNQ5T4W7 220 aa23.3■■□□□ 1.32
PTPN4-207ENST00000460162 PIP5KL1Q5T9C9 394 aa23.3■■□□□ 1.32
PTPN4-207ENST00000460162 GATAD2AQ86YP4 633 aa23.3■■□□□ 1.32
PTPN4-207ENST00000460162 EMC1Q8N766 993 aa23.3■■□□□ 1.32
PTPN4-207ENST00000460162 PRAMEF26H0Y7S4 382 aa23.29■■□□□ 1.32
PTPN4-207ENST00000460162 KPNA3O00505 521 aaPredicted RBP23.29■■□□□ 1.32
PTPN4-207ENST00000460162 SRGAP2O75044 1071 aa23.29■■□□□ 1.32
PTPN4-207ENST00000460162 SDC4P31431 198 aa23.29■■□□□ 1.32
PTPN4-207ENST00000460162 RXRGP48443 463 aa23.29■■□□□ 1.32
PTPN4-207ENST00000460162 TAS2R38P59533 333 aa23.29■■□□□ 1.32
PTPN4-207ENST00000460162 PRAMEF14Q5SWL7 426 aa23.29■■□□□ 1.32
PTPN4-207ENST00000460162 RETSATQ6NUM9 610 aa23.29■■□□□ 1.32
PTPN4-207ENST00000460162 NEK5Q6P3R8 708 aa23.29■■□□□ 1.32
PTPN4-207ENST00000460162 LINGO4Q6UY18 593 aa23.29■■□□□ 1.32
PTPN4-207ENST00000460162 OR7D4Q8NG98 312 aa23.29■■□□□ 1.32
PTPN4-207ENST00000460162 CEP44Q9C0F1 390 aa23.29■■□□□ 1.32
PTPN4-207ENST00000460162 DYRK4Q9NR20 520 aa23.29■■□□□ 1.32
PTPN4-207ENST00000460162 SIK3Q9Y2K2 1263 aa23.29■■□□□ 1.32
PTPN4-207ENST00000460162 DOCK9Q9BZ29 2069 aa23.29■■□□□ 1.32
PTPN4-207ENST00000460162 EPHB6O15197 1021 aa23.28■■□□□ 1.32
PTPN4-207ENST00000460162 SMAD6O43541 496 aaKnown RBP23.28■■□□□ 1.32
PTPN4-207ENST00000460162 RNGTTO60942 597 aaKnown RBP23.28■■□□□ 1.32
PTPN4-207ENST00000460162 RECQLP46063 649 aaPredicted RBP23.28■■□□□ 1.32
PTPN4-207ENST00000460162 SERPINH1P50454 418 aaKnown RBP23.28■■□□□ 1.32
PTPN4-207ENST00000460162 ATP11AP98196 1134 aa23.28■■□□□ 1.32
PTPN4-207ENST00000460162 NRG1Q02297 640 aaPredicted RBP23.28■■□□□ 1.32
PTPN4-207ENST00000460162 ARL13BQ3SXY8 428 aa23.28■■□□□ 1.32
PTPN4-207ENST00000460162 PPP1R16AQ96I34 528 aa23.28■■□□□ 1.32
PTPN4-207ENST00000460162 GBP4Q96PP9 640 aa23.28■■□□□ 1.32
PTPN4-207ENST00000460162 C11orf70Q9BRQ4 267 aa23.28■■□□□ 1.32
PTPN4-207ENST00000460162 CCDC86Q9H6F5 360 aaKnown RBP23.28■■□□□ 1.32
PTPN4-207ENST00000460162 ATP13A1Q9HD20 1204 aa23.28■■□□□ 1.32
PTPN4-207ENST00000460162 NLRC4Q9NPP4 1024 aa23.28■■□□□ 1.32
PTPN4-207ENST00000460162 PCDHGA1Q9Y5H4 931 aa23.28■■□□□ 1.32
PTPN4-207ENST00000460162 DSPP15924 2871 aaKnown RBP23.27■■□□□ 1.32
PTPN4-207ENST00000460162 ZFYVE26Q68DK2 2539 aa23.27■■□□□ 1.32
PTPN4-207ENST00000460162 CXorf51AA0A1B0GTR3 108 aa23.27■■□□□ 1.32
PTPN4-207ENST00000460162 CBX4O00257 560 aa23.27■■□□□ 1.32
PTPN4-207ENST00000460162 ZMPSTE24O75844 475 aa23.27■■□□□ 1.32
PTPN4-207ENST00000460162 CHRNB2P17787 502 aa23.27■■□□□ 1.32
PTPN4-207ENST00000460162 GLDCP23378 1020 aa23.27■■□□□ 1.32
PTPN4-207ENST00000460162 ETFBP38117 255 aa23.27■■□□□ 1.32
PTPN4-207ENST00000460162 STAT1P42224 750 aa23.27■■□□□ 1.32
PTPN4-207ENST00000460162 PTPN9P43378 593 aa23.27■■□□□ 1.32
PTPN4-207ENST00000460162 GSCP56915 257 aaPredicted RBP23.27■■□□□ 1.32
PTPN4-207ENST00000460162 GNA12Q03113 381 aa23.27■■□□□ 1.32
PTPN4-207ENST00000460162 SLC20A2Q08357 652 aa23.27■■□□□ 1.32
PTPN4-207ENST00000460162 STAT4Q14765 748 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms