RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 CBFA2T3O75081 653 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 TRIM16O95361 564 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 CALB1P05937 261 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 ADRA1BP35368 520 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 GSCP56915 257 aaPredicted RBP21.38■■□□□ 1.01
SRM-202ENST00000459997 PPP2CBP62714 309 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 PPP2CAP67775 309 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 CNTN1Q12860 1018 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 UNQ6494/PRO21346Q6UXR6 183 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 ZNF783Q6ZMS7 281 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 STRADAQ7RTN6 431 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 DRC7Q8IY82 874 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 OR2A12Q8NGT7 310 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 FAM172AQ8WUF8 416 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 SKA1Q96BD8 255 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 AGPAT1Q99943 283 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 SELENOOQ9BVL4 669 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 KDM4CQ9H3R0 1056 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 ATP13A1Q9HD20 1204 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 OR12D3Q9UGF7 316 aa21.38■■□□□ 1.01
SRM-202ENST00000459997 TPX2Q9ULW0 747 aaKnown RBP21.38■■□□□ 1.01
SRM-202ENST00000459997 C1QTNF9BB2RNN3 333 aa21.37■■□□□ 1.01
SRM-202ENST00000459997 H0Y8X5 98 aa21.37■■□□□ 1.01
SRM-202ENST00000459997 PLRG1O43660 514 aaKnown RBP21.37■■□□□ 1.01
SRM-202ENST00000459997 C1QTNF9P0C862 333 aa21.37■■□□□ 1.01
SRM-202ENST00000459997 CD38P28907 300 aa21.37■■□□□ 1.01
SRM-202ENST00000459997 RFC1P35251 1148 aaPredicted RBP21.37■■□□□ 1.01
SRM-202ENST00000459997 CCT8P50990 548 aa21.37■■□□□ 1.01
SRM-202ENST00000459997 CLCN6P51797 869 aa21.37■■□□□ 1.01
SRM-202ENST00000459997 GNA12Q03113 381 aa21.37■■□□□ 1.01
SRM-202ENST00000459997 SUZ12Q15022 739 aaKnown RBP21.37■■□□□ 1.01
SRM-202ENST00000459997 AGBL4Q5VU57 503 aa21.37■■□□□ 1.01
SRM-202ENST00000459997 RWDD4Q6NW29 188 aaKnown RBP21.37■■□□□ 1.01
SRM-202ENST00000459997 C22orf39Q6P5X5 142 aa21.37■■□□□ 1.01
SRM-202ENST00000459997 MON1BQ7L1V2 547 aa21.37■■□□□ 1.01
SRM-202ENST00000459997 C3orf20Q8ND61 904 aa21.37■■□□□ 1.01
SRM-202ENST00000459997 RHBDD1Q8TEB9 315 aa21.37■■□□□ 1.01
SRM-202ENST00000459997 SERAC1Q96JX3 654 aa21.37■■□□□ 1.01
SRM-202ENST00000459997 FUCA2Q9BTY2 467 aa21.37■■□□□ 1.01
SRM-202ENST00000459997 KLK13Q9UKR3 277 aa21.37■■□□□ 1.01
SRM-202ENST00000459997 NEUROG3Q9Y4Z2 214 aa21.37■■□□□ 1.01
SRM-202ENST00000459997 AKAP13Q12802 2813 aa21.37■■□□□ 1.01
SRM-202ENST00000459997 SYCE3A1L190 88 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 WNT9AO14904 365 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 LATO43561 262 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 WNT1P04628 370 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 CTSLP07711 333 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 FTH1P19P0C7X4 201 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 FERP16591 822 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 GPD1P21695 349 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 CHRNA3P32297 505 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 HDAC4P56524 1084 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 NRG1Q02297 640 aaPredicted RBP21.36■■□□□ 1.01
SRM-202ENST00000459997 MANEALQ5VSG8 457 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 RETSATQ6NUM9 610 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 DBX2Q6ZNG2 339 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 CHCHD4Q8N4Q1 142 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 CCDC185Q8N715 623 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 CENPIQ92674 756 aaPredicted RBP21.36■■□□□ 1.01
SRM-202ENST00000459997 BPIFA3Q9BQP9 254 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 OSBPL2Q9H1P3 480 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 TNKS2Q9H2K2 1166 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 BTBD3Q9Y2F9 522 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 USP24Q9UPU5 2620 aa21.36■■□□□ 1.01
SRM-202ENST00000459997 FAM72CH0Y354 149 aa21.35■■□□□ 1.01
SRM-202ENST00000459997 KPNA3O00505 521 aaPredicted RBP21.35■■□□□ 1.01
SRM-202ENST00000459997 TEX33O43247 280 aa21.35■■□□□ 1.01
SRM-202ENST00000459997 PROS1P07225 676 aa21.35■■□□□ 1.01
SRM-202ENST00000459997 CCDC172P0C7W6 258 aa21.35■■□□□ 1.01
SRM-202ENST00000459997 MAT2AP31153 395 aaKnown RBP21.35■■□□□ 1.01
SRM-202ENST00000459997 RECQLP46063 649 aaPredicted RBP21.35■■□□□ 1.01
SRM-202ENST00000459997 SERPINH1P50454 418 aaKnown RBP21.35■■□□□ 1.01
SRM-202ENST00000459997 IL9RQ01113 521 aa21.35■■□□□ 1.01
SRM-202ENST00000459997 C1QBPQ07021 282 aaKnown RBP21.35■■□□□ 1.01
SRM-202ENST00000459997 FAM72AQ5TYM5 149 aa21.35■■□□□ 1.01
SRM-202ENST00000459997 FAM72DQ6L9T8 149 aa21.35■■□□□ 1.01
SRM-202ENST00000459997 DNAJC24Q6P3W2 148 aa21.35■■□□□ 1.01
SRM-202ENST00000459997 WDR59Q6PJI9 974 aa21.35■■□□□ 1.01
SRM-202ENST00000459997 RAB44Q7Z6P3 723 aaPredicted RBP21.35■■□□□ 1.01
SRM-202ENST00000459997 GLRX5Q86SX6 157 aa21.35■■□□□ 1.01
SRM-202ENST00000459997 PRPF39Q86UA1 669 aaKnown RBP21.35■■□□□ 1.01
SRM-202ENST00000459997 FAM72BQ86X60 149 aa21.35■■□□□ 1.01
SRM-202ENST00000459997 BAHD1Q8TBE0 780 aaPredicted RBP21.35■■□□□ 1.01
SRM-202ENST00000459997 GRIN3AQ8TCU5 1115 aa21.35■■□□□ 1.01
SRM-202ENST00000459997 APOBEC2Q9Y235 224 aaKnown RBP21.35■■□□□ 1.01
SRM-202ENST00000459997 A0A1W2PR77 199 aa21.34■■□□□ 1.01
SRM-202ENST00000459997 SIGLEC16A6NMB1 481 aa21.34■■□□□ 1.01
SRM-202ENST00000459997 SMTNL1A8MU46 457 aa21.34■■□□□ 1.01
SRM-202ENST00000459997 PCDHGA12O60330 932 aa21.34■■□□□ 1.01
SRM-202ENST00000459997 DFNA5O60443 496 aa21.34■■□□□ 1.01
SRM-202ENST00000459997 ZMPSTE24O75844 475 aa21.34■■□□□ 1.01
SRM-202ENST00000459997 PRNPP04156 253 aa21.34■■□□□ 1.01
SRM-202ENST00000459997 PLEKP08567 350 aaPredicted RBP21.34■■□□□ 1.01
SRM-202ENST00000459997 RHOQP17081 205 aa21.34■■□□□ 1.01
SRM-202ENST00000459997 ARF5P84085 180 aa21.34■■□□□ 1.01
SRM-202ENST00000459997 SLC45A4Q5BKX6 768 aa21.34■■□□□ 1.01
SRM-202ENST00000459997 PIP5KL1Q5T9C9 394 aa21.34■■□□□ 1.01
SRM-202ENST00000459997 NAPEPLDQ6IQ20 393 aa21.34■■□□□ 1.01
SRM-202ENST00000459997 TRIM69Q86WT6 500 aa21.34■■□□□ 1.01
SRM-202ENST00000459997 PNPLA1Q8N8W4 532 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms