RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 IL17BQ9UHF5 180 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 XPO7Q9UIA9 1087 aaKnown RBP8.11□□□□□ -1.11
HPS4-207ENST00000459918 SARDHQ9UL12 918 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 COL12A1Q99715 3063 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 UBR5O95071 2799 aaPredicted RBP8.1□□□□□ -1.11
HPS4-207ENST00000459918 TCAF2A6NFQ2 919 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 K7ELQ4 463 aaPredicted RBP8.1□□□□□ -1.11
HPS4-207ENST00000459918 MCF2LO15068 1137 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 SCAMP1O15126 338 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 NUDT7P0C024 238 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 BRD2P25440 801 aaKnown RBP8.1□□□□□ -1.11
HPS4-207ENST00000459918 RPIAP49247 311 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 KRT83P78385 493 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 NFKB2Q00653 900 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 CENPCQ03188 943 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 ENPEPQ07075 957 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 CETN1Q12798 172 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 NNTQ13423 1086 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 STILQ15468 1287 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 NFIL3Q16649 462 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 DEFB133Q30KQ1 61 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 CBWD6Q4V339 395 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 CBWD3Q5JTY5 395 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 CBWD5Q5RIA9 395 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 GUSBP11Q6P575 273 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 LCLAT1Q6UWP7 414 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 PARGQ86W56 976 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 HORMAD1Q86X24 394 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 SLC22A18ASQ8N1D0 253 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 GUF1Q8N442 669 aaKnown RBP8.1□□□□□ -1.11
HPS4-207ENST00000459918 ZSCAN1Q8NBB4 408 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 TMEM145Q8NBT3 493 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 LMX1AQ8TE12 382 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 GRAMD1AQ96CP6 724 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 SLC46A1Q96NT5 459 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 SEPT3Q9UH03 358 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 USP25Q9UHP3 1055 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 PPM1HQ9ULR3 514 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 DOLKQ9UPQ8 538 aa8.1□□□□□ -1.11
HPS4-207ENST00000459918 CCDC187A0A096LP49 1063 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 KCNU1A8MYU2 1149 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 AGRPO00253 132 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 NEMP1O14524 444 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 FPGTO14772 594 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 AQP9O43315 295 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 ENDOD1O94919 500 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 RHOBTB3O94955 611 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 TRUB2O95900 331 aaKnown RBP8.09□□□□□ -1.11
HPS4-207ENST00000459918 F13A1P00488 732 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 PRNPP04156 253 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 PAEPP09466 180 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 SLC2A3P11169 496 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 KRT5P13647 590 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 JUNDP17535 347 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 CHRNA3P32297 505 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 SYKP43405 635 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 THOP1P52888 689 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 TAS2R38P59533 333 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 CLN3Q13286 438 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 SGCGQ13326 291 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 PDE1CQ14123 709 aaPredicted RBP8.09□□□□□ -1.11
HPS4-207ENST00000459918 DRAP1Q14919 205 aaPredicted RBP8.09□□□□□ -1.11
HPS4-207ENST00000459918 EDRF1Q3B7T1 1238 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 PIP5KL1Q5T9C9 394 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 SEL1L3Q68CR1 1132 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 NEK5Q6P3R8 708 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 ZNF574Q6ZN55 896 aaPredicted RBP8.09□□□□□ -1.11
HPS4-207ENST00000459918 GCNT7Q6ZNI0 430 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 DCP2Q8IU60 420 aaKnown RBP8.09□□□□□ -1.11
HPS4-207ENST00000459918 TPCN2Q8NHX9 752 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 FRS2Q8WU20 508 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 SLC35F5Q8WV83 523 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 SNRNP27Q8WVK2 155 aaKnown RBP8.09□□□□□ -1.11
HPS4-207ENST00000459918 TFAP2BQ92481 460 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 EXTL1Q92935 676 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 CCDC34Q96HJ3 373 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 HSFY1Q96LI6 401 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 NT5C1BQ96P26 610 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 NOX5Q96PH1 765 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 STRADBQ9C0K7 418 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 CAAP1Q9H8G2 361 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 POPDC2Q9HBU9 364 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 SEPT10Q9P0V9 454 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 IL36AQ9UHA7 158 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 VANGL2Q9ULK5 521 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 PCDHGA8Q9Y5G5 932 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 ENTPD2Q9Y5L3 495 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 KIF26BQ2KJY2 2108 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 SPTA1P02549 2419 aa8.09□□□□□ -1.11
HPS4-207ENST00000459918 PTPN13Q12923 2485 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 PMS2P1A4D2B8 440 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 ATP9BO43861 1147 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 TCEA3O75764 348 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 ADCY5O95622 1261 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 CALCAP01258 141 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 CSF2P04141 144 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 NTRK1P04629 796 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 ANXA6P08133 673 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 RHOCP08134 193 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 ITGA2BP08514 1039 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms