RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 IFI16Q16666 785 aaKnown RBP13.1□□□□□ -0.31
COL18A1-206ENST00000459895 ZNF528Q3MIS6 628 aa13.1□□□□□ -0.31
COL18A1-206ENST00000459895 SDE2Q6IQ49 451 aa13.1□□□□□ -0.31
COL18A1-206ENST00000459895 MFSD7Q6UXD7 560 aa13.1□□□□□ -0.31
COL18A1-206ENST00000459895 ALG3Q92685 438 aa13.1□□□□□ -0.31
COL18A1-206ENST00000459895 NELL1Q92832 810 aa13.1□□□□□ -0.31
COL18A1-206ENST00000459895 RNF25Q96BH1 459 aaPredicted RBP13.1□□□□□ -0.31
COL18A1-206ENST00000459895 PPP1R9BQ96SB3 815 aa13.1□□□□□ -0.31
COL18A1-206ENST00000459895 MKRN2Q9H000 416 aaKnown RBP13.1□□□□□ -0.31
COL18A1-206ENST00000459895 PRSS16Q9NQE7 514 aa13.1□□□□□ -0.31
COL18A1-206ENST00000459895 BCCIPQ9P287 314 aaKnown RBP eCLIP13.1□□□□□ -0.31
COL18A1-206ENST00000459895 FCF1Q9Y324 198 aaKnown RBP13.1□□□□□ -0.31
COL18A1-206ENST00000459895 SYNCRIPO60506 623 aaKnown RBP13.09□□□□□ -0.31
COL18A1-206ENST00000459895 TMCC1O94876 653 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 VASPP50552 380 aaPredicted RBP13.09□□□□□ -0.31
COL18A1-206ENST00000459895 PAPOLAP51003 745 aaKnown RBP13.09□□□□□ -0.31
COL18A1-206ENST00000459895 DNA2P51530 1060 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 PTPN5P54829 565 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 DYNLT1P63172 113 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 GBE1Q04446 702 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 SRSF5Q13243 272 aaKnown RBP13.09□□□□□ -0.31
COL18A1-206ENST00000459895 PAFAH1B3Q15102 231 aaKnown RBP13.09□□□□□ -0.31
COL18A1-206ENST00000459895 E2F5Q15329 346 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 TAZQ16635 292 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 DCAF12L1Q5VU92 463 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 RETSATQ6NUM9 610 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 KIAA1324Q6UXG2 1013 aaKnown RBP13.09□□□□□ -0.31
COL18A1-206ENST00000459895 SPOCD1Q6ZMY3 1216 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 ZNF662Q6ZS27 426 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 PEX26Q7Z412 305 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 WDR5BQ86VZ2 330 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 VSIG1Q86XK7 387 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 CCDC50Q8IVM0 306 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 MAP7D3Q8IWC1 876 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 ATPAF2Q8N5M1 289 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 CAMKK1Q8N5S9 505 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 PLD5Q8N7P1 536 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 ATP11CQ8NB49 1132 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 KIAA1524Q8TCG1 905 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 MRGPRX1Q96LB2 322 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 RNF157Q96PX1 679 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 PRRX2Q99811 253 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 HERPUD2Q9BSE4 406 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 TM6SF2Q9BZW4 377 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 TNKS2Q9H2K2 1166 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 PYCARDQ9ULZ3 195 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 R4GN57 208 aa13.09□□□□□ -0.31
COL18A1-206ENST00000459895 NUP205Q92621 2012 aa13.08□□□□□ -0.31
COL18A1-206ENST00000459895 hCG_1818297A0A087WSY0 165 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 CCDC66A2RUB6 948 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 ARHGAP42A6NI28 874 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 J3KR12 359 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 AXIN1O15169 862 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 KDELR3O43731 214 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 PRAMEF11O60813 436 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 ZNF821O75541 412 aaPredicted RBP13.08□□□□□ -0.32
COL18A1-206ENST00000459895 ALDH1A2O94788 518 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 HOXA6P31267 233 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 CLCN6P51797 869 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 ADCY2Q08462 1091 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 ELAVL3Q14576 367 aaKnown RBP13.08□□□□□ -0.32
COL18A1-206ENST00000459895 LLGL1Q15334 1064 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 DLG2Q15700 870 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 ACCSLQ4AC99 568 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 C9orf64Q5T6V5 341 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 SLC9A4Q6AI14 798 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 LONP2Q86WA8 852 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 RFX6Q8HWS3 928 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 SYCE1Q8N0S2 351 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 STK40Q8N2I9 435 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 RNF10Q8N5U6 811 aaKnown RBP13.08□□□□□ -0.32
COL18A1-206ENST00000459895 ZBTB44Q8NCP5 570 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 OR2T3Q8NH03 318 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 EXD1Q8NHP7 514 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 PTPRN2Q92932 1015 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 ZNF419Q96HQ0 510 aaPredicted RBP13.08□□□□□ -0.32
COL18A1-206ENST00000459895 RBM41Q96IZ5 413 aaKnown RBP13.08□□□□□ -0.32
COL18A1-206ENST00000459895 KCNH6Q9H252 994 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 SP110Q9HB58 689 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 ZSCAN32Q9NX65 697 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 LHX3Q9UBR4 397 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 UBA2Q9UBT2 640 aaPredicted RBP13.08□□□□□ -0.32
COL18A1-206ENST00000459895 EBF1Q9UH73 591 aa13.08□□□□□ -0.32
COL18A1-206ENST00000459895 ZSCAN5CA6NGD5 496 aaPredicted RBP13.07□□□□□ -0.32
COL18A1-206ENST00000459895 USP27XA6NNY8 438 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 APOL1O14791 398 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 DDX3YO15523 660 aaKnown RBP13.07□□□□□ -0.32
COL18A1-206ENST00000459895 BNIP3LO60238 219 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 KRT10P13645 584 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 PECAM1P16284 738 aaPredicted RBP13.07□□□□□ -0.32
COL18A1-206ENST00000459895 NNMTP40261 264 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 PSMD8P48556 350 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 METAP1P53582 386 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 GEMIN4P57678 1058 aaKnown RBP13.07□□□□□ -0.32
COL18A1-206ENST00000459895 GALNT2Q10471 571 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 ODF2Q5BJF6 829 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 ZNF776Q68DI1 518 aaPredicted RBP13.07□□□□□ -0.32
COL18A1-206ENST00000459895 AADACL2Q6P093 401 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 NPNTQ6UXI9 565 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 PGBD3Q8N328 593 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms