RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ATAT1Q5SQI0 421 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 TANGO2Q6ICL3 276 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 TMCO3Q6UWJ1 677 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 NLRP14Q86W24 1093 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 DDX42Q86XP3 938 aaKnown RBP eCLIP10.57□□□□□ -0.72
USP39-210ENST00000459775 CCDC105Q8IYK2 499 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 FAM71DQ8N9W8 422 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 SLC35B2Q8TB61 432 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 WFDC5Q8TCV5 224 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 ASIC4Q96FT7 647 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 NAP1L3Q99457 506 aaPredicted RBP10.57□□□□□ -0.72
USP39-210ENST00000459775 SLC39A8Q9C0K1 460 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 ZNF148Q9UQR1 794 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 ACTL7AQ9Y615 435 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 CLUHO75153 1309 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 A0A0D9SEW6 157 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 GOLGA6L10A0A0M3HER8 536 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 H7C0C1 242 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 DFFAO00273 331 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 TBL1XO60907 577 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 PAPLNO95428 1278 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 BPNT1O95861 308 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 POU2F2P09086 479 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 RBL1P28749 1068 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 ACVRL1P37023 503 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 ATP5OP48047 213 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 HCAR3P49019 387 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 BYSLQ13895 437 aaKnown RBP10.56□□□□□ -0.72
USP39-210ENST00000459775 NOMO1Q15155 1222 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 OASLQ15646 514 aaKnown RBP10.56□□□□□ -0.72
USP39-210ENST00000459775 CCNG2Q16589 344 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 CYP1B1Q16678 543 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 FSCBQ5H9T9 825 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 TMEM25Q86YD3 366 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 ARHGAP12Q8IWW6 846 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 MMGT1Q8N4V1 131 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.56□□□□□ -0.72
USP39-210ENST00000459775 LEMD2Q8NC56 503 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 MYRIPQ8NFW9 859 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 TTC8Q8TAM2 541 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 ASB16Q96NS5 453 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 PNKPQ96T60 521 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 PLA2G2FQ9BZM2 168 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 ZYG11BQ9C0D3 744 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 LRRC19Q9H756 370 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 ANKZF1Q9H8Y5 726 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 PPCSQ9HAB8 311 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 ZNF304Q9HCX3 659 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 ZNF212Q9UDV6 495 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 EFR3BQ9Y2G0 817 aa10.56□□□□□ -0.72
USP39-210ENST00000459775 IGLV3-10A0A075B6K4 115 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 UQCRHLA0A096LP55 91 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 DRGXA6NNA5 263 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 EFCAB8A8MWE9 144 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 KCNK1O00180 336 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 TRIM24O15164 1050 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 FGF19O95750 216 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 IFNB1P01574 187 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 UQCRHP07919 91 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 VAV1P15498 845 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 BTF3P20290 206 aaKnown RBP10.55□□□□□ -0.72
USP39-210ENST00000459775 GBP2P32456 591 aaPredicted RBP10.55□□□□□ -0.72
USP39-210ENST00000459775 DR1Q01658 176 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 ZNF77Q15935 545 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 CES5AQ6NT32 575 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 IRGCQ6NXR0 463 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 DARS2Q6PI48 645 aaKnown RBP10.55□□□□□ -0.72
USP39-210ENST00000459775 UNC5DQ6UXZ4 953 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 LRRC31Q6UY01 552 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 HTR3DQ70Z44 454 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 RTL3Q8N8U3 475 aaKnown RBP10.55□□□□□ -0.72
USP39-210ENST00000459775 CCNYQ8ND76 341 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 ANKK1Q8NFD2 765 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 FLCNQ8NFG4 579 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 THOC1Q96FV9 657 aaKnown RBP10.55□□□□□ -0.72
USP39-210ENST00000459775 KXD1Q9BQD3 176 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 RCOR3Q9P2K3 495 aaPredicted RBP10.55□□□□□ -0.72
USP39-210ENST00000459775 USP15Q9Y4E8 981 aaPredicted RBP10.55□□□□□ -0.72
USP39-210ENST00000459775 OTOL1A6NHN0 477 aaPredicted RBP10.55□□□□□ -0.72
USP39-210ENST00000459775 HOXB8P17481 243 aaPredicted RBP10.55□□□□□ -0.72
USP39-210ENST00000459775 GLDCP23378 1020 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 FCARP24071 287 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 OR1E1P30953 314 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 NUBP1P53384 320 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 CSE1LP55060 971 aaKnown RBP10.55□□□□□ -0.72
USP39-210ENST00000459775 BPIFB3P59826 476 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 TNK2Q07912 1038 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 GRM2Q14416 872 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 PAFAH1B3Q15102 231 aaKnown RBP10.55□□□□□ -0.72
USP39-210ENST00000459775 SPDYCQ5MJ68 293 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 C8orf74Q6P047 294 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 PARM1Q6UWI2 310 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 WDR75Q8IWA0 830 aaKnown RBP10.55□□□□□ -0.72
USP39-210ENST00000459775 PEX5LQ8IYB4 626 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 GSPT2Q8IYD1 628 aaKnown RBP10.55□□□□□ -0.72
USP39-210ENST00000459775 CARNMT1Q8N4J0 409 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 TDRD5Q8NAT2 981 aaKnown RBP10.55□□□□□ -0.72
USP39-210ENST00000459775 SMRP1Q8NCR6 262 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 DDI1Q8WTU0 396 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 RSAD2Q8WXG1 361 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms