RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CCNCP24863 283 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 PHBP35232 272 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 ETFBP38117 255 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 MAGEA6P43360 314 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 PGFP49763 221 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 YBEYP58557 167 aaPredicted RBP9.15□□□□□ -0.94
VPS50-207ENST00000458530 FAM193AP78312 1265 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 SLC10A2Q12908 348 aaPredicted RBP9.15□□□□□ -0.94
VPS50-207ENST00000458530 PRPSAP1Q14558 356 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 PARP15Q460N3 678 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 CWF19L1Q69YN2 538 aaKnown RBP9.15□□□□□ -0.94
VPS50-207ENST00000458530 CNPY4Q8N129 248 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 UMODL1-AS1Q8N2C9 162 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 NAT8LQ8N9F0 302 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 GLIS1Q8NBF1 620 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 TSEN2Q8NCE0 465 aaKnown RBP9.15□□□□□ -0.94
VPS50-207ENST00000458530 MCUQ8NE86 351 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 CPT1BQ92523 772 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 FATE1Q969F0 183 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 RMDN1Q96DB5 314 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 LRRC39Q96DD0 335 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 P2RY11Q96G91 374 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 TSGA13Q96PP4 275 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 ADAM7Q9H2U9 754 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 XAB2Q9HCS7 855 aaKnown RBP9.15□□□□□ -0.94
VPS50-207ENST00000458530 SEPT10Q9P0V9 454 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 KLHL8Q9P2G9 620 aaPredicted RBP9.15□□□□□ -0.94
VPS50-207ENST00000458530 XPO7Q9UIA9 1087 aaKnown RBP9.15□□□□□ -0.94
VPS50-207ENST00000458530 VANGL2Q9ULK5 521 aa9.15□□□□□ -0.94
VPS50-207ENST00000458530 C2CD4DB7Z1M9 353 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 DFFAO00273 331 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 RAMP2O60895 175 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 STC2O76061 302 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 MAP3K6O95382 1288 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 TTC4O95801 387 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 TBX18O95935 607 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 F11P03951 625 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 VAV1P15498 845 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 GABRR2P28476 465 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 ATP5DP30049 168 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 CORO1AP31146 461 aaKnown RBP9.14□□□□□ -0.95
VPS50-207ENST00000458530 GGCXP38435 758 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 CLCN4P51793 760 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 SEMA5AQ13591 1074 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 KCNJ11Q14654 390 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 PARP6Q2NL67 630 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 ANKRD20A2Q5SQ80 823 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 ANKRD20A1Q5TYW2 823 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 ANKRD20A3Q5VUR7 823 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 RAP1GAP2Q684P5 730 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 IQCKQ8N0W5 287 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 BBS5Q8N3I7 341 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 NPWQ8N729 165 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 ATP11CQ8NB49 1132 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 CCDC110Q8TBZ0 833 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 ZIM3Q96PE6 472 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 LGMNQ99538 433 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 KLF16Q9BXK1 252 aaPredicted RBP9.14□□□□□ -0.95
VPS50-207ENST00000458530 MAGEB5Q9BZ81 275 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 CDC42EP4Q9H3Q1 356 aaKnown RBP9.14□□□□□ -0.95
VPS50-207ENST00000458530 SP110Q9HB58 689 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 TRPC7Q9HCX4 862 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 SAYSD1Q9NPB0 183 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 MAN1C1Q9NR34 630 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 ZDHHC7Q9NXF8 308 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 FAM53CQ9NYF3 392 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 IGSF9Q9P2J2 1179 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 NEU3Q9UQ49 428 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 SNX10Q9Y5X0 201 aa9.14□□□□□ -0.95
VPS50-207ENST00000458530 CHD8Q9HCK8 2581 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 A0A087WUV0 522 aaPredicted RBP9.13□□□□□ -0.95
VPS50-207ENST00000458530 A0A1B0GVM2 712 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 TCAF2A6NFQ2 919 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 DRGXA6NNA5 263 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 HMGB1P1B2RPK0 211 aaPredicted RBP9.13□□□□□ -0.95
VPS50-207ENST00000458530 ZNF197O14709 1029 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 RIPK2O43353 540 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 CLDN11O75508 207 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 ANXA9O76027 345 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 OLFM2O95897 454 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 CKMP06732 381 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 APRTP07741 180 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 GSTA2P09210 222 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 MLNP12872 115 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 PTPN2P17706 415 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 HDCP19113 662 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 PTPN3P26045 913 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 OAS2P29728 719 aaKnown RBP9.13□□□□□ -0.95
VPS50-207ENST00000458530 OR1E1P30953 314 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 CHKAP35790 457 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 MAGEA4P43358 317 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 RENBPP51606 427 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 CDH4P55283 916 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 IFI35P80217 286 aaPredicted RBP9.13□□□□□ -0.95
VPS50-207ENST00000458530 SLC7A9P82251 487 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 PDIA2Q13087 525 aaKnown RBP9.13□□□□□ -0.95
VPS50-207ENST00000458530 CBLBQ13191 982 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 STAT4Q14765 748 aa9.13□□□□□ -0.95
VPS50-207ENST00000458530 UAP1Q16222 522 aaPredicted RBP9.13□□□□□ -0.95
VPS50-207ENST00000458530 C5orf22Q49AR2 442 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms