RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 CCDC163A0A0D9SF12 145 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 CXorf51AA0A1B0GTR3 108 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 GRID2IPA4D2P6 1211 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 C3orf70A6NLC5 250 aaPredicted RBP10.28□□□□□ -0.76
ATG4A-206ENST00000457035 GOLGA8CPA6NN73 597 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 TTC34A8MYJ7 566 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 RASA4BC9J798 803 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 H3BRJ5 948 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 DAPK3O43293 454 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 RASA4O43374 803 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 KDELR3O43731 214 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 ATP9BO43861 1147 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 RAMP2O60895 175 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 EPHX1P07099 455 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 ETFBP38117 255 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 ARL4AP40617 200 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 PXNP49023 591 aaPredicted RBP10.28□□□□□ -0.76
ATG4A-206ENST00000457035 NDST2P52849 883 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 ST8SIA6P61647 398 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 ARF5P84085 180 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 SLC20A2Q08357 652 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 CAMK2GQ13555 558 aaPredicted RBP10.28□□□□□ -0.76
ATG4A-206ENST00000457035 KRT81Q14533 505 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 HNRNPA1L2Q32P51 320 aaKnown RBP10.28□□□□□ -0.76
ATG4A-206ENST00000457035 FNDC3BQ53EP0 1204 aaKnown RBP10.28□□□□□ -0.76
ATG4A-206ENST00000457035 C9orf64Q5T6V5 341 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 ZNF662Q6ZS27 426 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 DAAM2Q86T65 1068 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 MAP7D3Q8IWC1 876 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 ARHGAP12Q8IWW6 846 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 RHOT1Q8IXI2 618 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 TXLNBQ8N3L3 684 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 SH2D3CQ8N5H7 860 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 RNF10Q8N5U6 811 aaKnown RBP10.28□□□□□ -0.76
ATG4A-206ENST00000457035 ZNF366Q8N895 744 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 ZBTB44Q8NCP5 570 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 TSTD1Q8NFU3 115 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 PCDH19Q8TAB3 1148 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 KIAA1524Q8TCG1 905 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 PTPRN2Q92932 1015 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 FAF2Q96CS3 445 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 ZNF830Q96NB3 372 aaPredicted RBP10.28□□□□□ -0.76
ATG4A-206ENST00000457035 C2orf49Q9BVC5 232 aaPredicted RBP10.28□□□□□ -0.76
ATG4A-206ENST00000457035 SLC39A8Q9C0K1 460 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 MTG2Q9H4K7 406 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 ATP13A1Q9HD20 1204 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 POLMQ9NP87 494 aaPredicted RBP10.28□□□□□ -0.76
ATG4A-206ENST00000457035 PRSS16Q9NQE7 514 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 HS3ST2Q9Y278 367 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 MFHAS1Q9Y4C4 1052 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 R4GN57 208 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 ANKRD36A6QL64 1941 aa10.28□□□□□ -0.76
ATG4A-206ENST00000457035 OTOGLQ3ZCN5 2332 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 TCRBV21S2A2A0A5A6 115 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 MACROD2A1Z1Q3 448 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 TARSL2A2RTX5 802 aaKnown RBP10.27□□□□□ -0.77
ATG4A-206ENST00000457035 K7ERQ8 282 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 CBX4O00257 560 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 SMAD6O43541 496 aaKnown RBP10.27□□□□□ -0.77
ATG4A-206ENST00000457035 PSTPIP1O43586 416 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 SPOPO43791 374 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 ZNF821O75541 412 aaPredicted RBP10.27□□□□□ -0.77
ATG4A-206ENST00000457035 APBB3O95704 486 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 SRCP12931 536 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 GABRG2P18507 467 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 GJC1P36383 396 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 NNMTP40261 264 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 FNTBP49356 437 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 COPAP53621 1224 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 NRLP54845 237 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 NAP1L1P55209 391 aaKnown RBP10.27□□□□□ -0.77
ATG4A-206ENST00000457035 SERINC3Q13530 473 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 DLG2Q15700 870 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 PARP15Q460N3 678 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 ANKRD20A8PQ5CZ79 823 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 HEATR6Q6AI08 1181 aaKnown RBP10.27□□□□□ -0.77
ATG4A-206ENST00000457035 IL31Q6EBC2 164 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 LINGO4Q6UY18 593 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 LAPTM4BQ86VI4 370 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 VSIG1Q86XK7 387 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 TP53INP2Q8IXH6 220 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 LZTR1Q8N653 840 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 NPWQ8N729 165 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 PQLC3Q8N755 202 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 NETO2Q8NC67 525 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 MDGA1Q8NFP4 955 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 ERLEC1Q96DZ1 483 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 HMCESQ96FZ2 354 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 CELF6Q96J87 481 aaKnown RBP10.27□□□□□ -0.77
ATG4A-206ENST00000457035 FAM129BQ96TA1 746 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 HINFPQ9BQA5 517 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 ZNF670Q9BS34 389 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 MKRN2Q9H000 416 aaKnown RBP10.27□□□□□ -0.77
ATG4A-206ENST00000457035 KCNF1Q9H3M0 494 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 KLHL11Q9NVR0 708 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 ZSCAN32Q9NX65 697 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 SLC25A13Q9UJS0 675 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 ACTL7AQ9Y615 435 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 SPTBN4Q9H254 2564 aa10.27□□□□□ -0.77
ATG4A-206ENST00000457035 EDDM13A0A1B0GTR0 161 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms