RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 SLC38A7Q9NVC3 462 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 CDH22Q9UJ99 828 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 FZD10Q9ULW2 581 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 APOBEC2Q9Y235 224 aaKnown RBP12.67□□□□□ -0.38
LINC00959-201ENST00000456581 USP3Q9Y6I4 520 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 TDRD15B5MCY1 1934 aaKnown RBP12.67□□□□□ -0.38
LINC00959-201ENST00000456581 OR4Q2P0C623 313 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 ITGAXP20702 1163 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 TGM2P21980 687 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 CRABP2P29373 138 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 SERPINB5P36952 375 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 PGFP49763 221 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 COPAP53621 1224 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 WASHC5Q12768 1159 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 MBTPS1Q14703 1052 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 DNAL1Q4LDG9 190 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 FAM91A1Q658Y4 838 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 PDPK2PQ6A1A2 396 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 RTN4RL1Q86UN2 441 aaPredicted RBP12.66□□□□□ -0.38
LINC00959-201ENST00000456581 WDR75Q8IWA0 830 aaKnown RBP12.66□□□□□ -0.38
LINC00959-201ENST00000456581 COLGALT1Q8NBJ5 622 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 OR6Y1Q8NGX8 325 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 SCAMP5Q8TAC9 235 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 CD99L2Q8TCZ2 262 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 GDPD5Q8WTR4 605 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 ARNTL2Q8WYA1 636 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 FCRL3Q96P31 734 aaPredicted RBP12.66□□□□□ -0.38
LINC00959-201ENST00000456581 NPY6RQ99463 290 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 SPATA16Q9BXB7 569 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 WDR55Q9H6Y2 383 aaPredicted RBP12.66□□□□□ -0.38
LINC00959-201ENST00000456581 GIT1Q9Y2X7 761 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 HEMK1Q9Y5R4 338 aaPredicted RBP12.66□□□□□ -0.38
LINC00959-201ENST00000456581 A0A0U1RQF3 1178 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 KLHL33A6NCF5 533 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 ITGA2BP08514 1039 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 NCAM1P13591 858 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 AOC1P19801 751 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 SP3Q02447 781 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 FAM43BQ6ZT52 329 aaPredicted RBP12.66□□□□□ -0.38
LINC00959-201ENST00000456581 ZNF280BQ86YH2 543 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 CCNYQ8ND76 341 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 OR52B2Q96RD2 323 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 GORASP1Q9BQQ3 440 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 NUDT5Q9UKK9 219 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 SHROOM3Q8TF72 1996 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 ZNF195O14628 629 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 LTFP02788 710 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 DAOAP59103 153 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 DEUP1Q05D60 604 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 STRADAQ7RTN6 431 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 CHST12Q9NRB3 414 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 POMPQ9Y244 141 aa12.66□□□□□ -0.38
LINC00959-201ENST00000456581 HHLA1C9JL84 531 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 STX16-NPEPL1H3BU86 382 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 RNF103O00237 685 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 DAB1O75553 588 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 CHRNGP07510 517 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 NELFEP18615 380 aaKnown RBP12.65□□□□□ -0.38
LINC00959-201ENST00000456581 TYK2P29597 1187 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 NOS2P35228 1153 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 NIPAL4Q0D2K0 466 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 LAMB3Q13751 1172 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 DSC3Q14574 896 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 GRAMD1BQ3KR37 738 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 LIN52Q52LA3 116 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 MRPL10Q7Z7H8 261 aaKnown RBP12.65□□□□□ -0.38
LINC00959-201ENST00000456581 PDSS2Q86YH6 399 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 TRIM42Q8IWZ5 723 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 REM2Q8IYK8 340 aaPredicted RBP12.65□□□□□ -0.38
LINC00959-201ENST00000456581 RNF139Q8WU17 664 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 NT5C3BQ969T7 300 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 COG4Q9H9E3 785 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 DDIT4Q9NX09 232 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 UBAP1Q9NZ09 502 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 AIM2O14862 343 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 ARL4AP40617 200 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 LHX1P48742 406 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 ACLYP53396 1101 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 TBL3Q12788 808 aaKnown RBP12.65□□□□□ -0.38
LINC00959-201ENST00000456581 ZRSR2Q15696 482 aaKnown RBP12.65□□□□□ -0.38
LINC00959-201ENST00000456581 TRIM71Q2Q1W2 868 aaKnown RBP12.65□□□□□ -0.38
LINC00959-201ENST00000456581 TMEM198Q66K66 360 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 BHLHA9Q7RTU4 235 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 PTAR1Q7Z6K3 402 aaPredicted RBP12.65□□□□□ -0.38
LINC00959-201ENST00000456581 SPATA6LQ8N4H0 392 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 FAM156AQ8NDB6 213 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 OR52K1Q8NGK4 314 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 HTR3CQ8WXA8 447 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 DNAI2Q9GZS0 605 aa12.65□□□□□ -0.38
LINC00959-201ENST00000456581 WDR6Q9NNW5 1121 aaKnown RBP12.65□□□□□ -0.38
LINC00959-201ENST00000456581 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.64□□□□□ -0.39
LINC00959-201ENST00000456581 GCATO75600 419 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 RALBP11234 206 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 BTKQ06187 659 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 SDHAF4Q5VUM1 108 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 CDKL3Q8IVW4 592 aaPredicted RBP12.64□□□□□ -0.39
LINC00959-201ENST00000456581 PNPLA1Q8N8W4 532 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 MCUQ8NE86 351 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 KCTD13Q8WZ19 329 aa12.64□□□□□ -0.39
LINC00959-201ENST00000456581 USP13Q92995 863 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms