RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	CSK	P41240	450 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	WAS	P42768	502 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	AIF1	P55008	147 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	CDH4	P55283	916 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	SEMA3B	Q13214	749 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	SLC12A1	Q13621	1099 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	PPP2R5E	Q16537	467 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	PLEKHG6	Q3KR16	790 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	ARL13B	Q3SXY8	428 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	MAP9	Q49MG5	647 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	PITRM1	Q5JRX3	1037 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	MBLAC2	Q68D91	279 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	ZC3H14	Q6PJT7	736 aa	Known RBP	10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	NLRP14	Q86W24	1093 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	RASGEF1C	Q8N431	466 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	NIPA2	Q8N8Q9	360 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	SPATA4	Q8NEY3	305 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	MDGA1	Q8NFP4	955 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	TSTD1	Q8NFU3	115 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	COG1	Q8WTW3	980 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	CYB5D2	Q8WUJ1	264 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	UCMA	Q8WVF2	138 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	MRGPRX3	Q96LB0	322 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	PEBP4	Q96S96	227 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	NAP1L3	Q99457	506 aa	Predicted RBP	10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	FEM1A	Q9BSK4	669 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	EPC1	Q9H2F5	836 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	ARFGAP3	Q9NP61	516 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	MPP6	Q9NZW5	540 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	CTTNBP2NL	Q9P2B4	639 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	FZD10	Q9ULW2	581 aa		10.21	□□□□□ -0.77
CHEK2-221	ENST00000456369	WDR87	Q6ZQQ6	2873 aa		10.21	□□□□□ -0.78
CHEK2-221	ENST00000456369	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	CCDC188	H7C350	402 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	PGRMC1	O00264	195 aa	Known RBP	10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	PDE2A	O00408	941 aa	Predicted RBP	10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	KCNK3	O14649	394 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	BUB1B	O60566	1050 aa	Predicted RBP	10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	LRCH4	O75427	683 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	LRIG2	O94898	1065 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	ATP5B	P06576	529 aa	Known RBP	10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	HOXB2	P14652	356 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	PRKCH	P24723	683 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	L1CAM	P32004	1257 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	CNR2	P34972	360 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	PCK1	P35558	622 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	CTSO	P43234	321 aa	Predicted RBP	10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	OXCT1	P55809	520 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	SRSF5	Q13243	272 aa	Known RBP	10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	ZNF177	Q13360	481 aa	Predicted RBP	10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	HEATR6	Q6AI08	1181 aa	Known RBP	10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	ANO7	Q6IWH7	933 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	SCYL2	Q6P3W7	929 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	LRRC31	Q6UY01	552 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	SETD3	Q86TU7	594 aa	Predicted RBP	10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	PYROXD2	Q8N2H3	581 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	UBL4B	Q8N7F7	174 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	KDM1B	Q8NB78	822 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	SUMF1	Q8NBK3	374 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	NOA1	Q8NC60	698 aa	Known RBP	10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	ZNF564	Q8TBZ8	553 aa	Predicted RBP	10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	NUP85	Q9BW27	656 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	ZYG11B	Q9C0D3	744 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	SEMA4A	Q9H3S1	761 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	RETREG1	Q9H6L5	497 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	OSGEP	Q9NPF4	335 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	PLA2G4C	Q9UP65	541 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	RAD54B	Q9Y620	910 aa		10.2	□□□□□ -0.78
CHEK2-221	ENST00000456369	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369		A0A0D9SEW6	157 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	TCRBV21S2A2	A0A5A6	115 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	AXIN1	O15169	862 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	ZRANB2	O95218	330 aa	Known RBP eCLIP	10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	ASL	P04424	464 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	TCF4	P15884	667 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	RHOQ	P17081	205 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	GABRG2	P18507	467 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	POLR2E	P19388	210 aa	Known RBP	10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	CTNNA2	P26232	953 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	IL1R2	P27930	398 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	TNFRSF8	P28908	595 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	MIP	P30301	263 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	OR1E1	P30953	314 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	SLC1A1	P43005	524 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	COPA	P53621	1224 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	ECT2L	Q008S8	904 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	CAMK2G	Q13555	558 aa	Predicted RBP	10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	PIGH	Q14442	188 aa	Predicted RBP	10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	ACAP1	Q15027	740 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	E2F5	Q15329	346 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	EFHC2	Q5JST6	749 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	DAB2IP	Q5VWQ8	1189 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	SDE2	Q6IQ49	451 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	SERPINA13P	Q6UXR4	307 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	TFAP2D	Q7Z6R9	452 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	PSTK	Q8IV42	348 aa	Known RBP	10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	CCDC117	Q8IWD4	279 aa	Predicted RBP	10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	GAB3	Q8WWW8	586 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	BTBD6	Q96KE9	485 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	MRGPRX1	Q96LB2	322 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms