RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 FAM129BQ96TA1 746 aa17.74■□□□□ 0.43
USP39-208ENST00000455732 ACE2Q9BYF1 805 aaPredicted RBP17.74■□□□□ 0.43
USP39-208ENST00000455732 PCED1AQ9H1Q7 454 aa17.74■□□□□ 0.43
USP39-208ENST00000455732 MAGEH1Q9H213 219 aa17.74■□□□□ 0.43
USP39-208ENST00000455732 PABPC3Q9H361 631 aaKnown RBP17.74■□□□□ 0.43
USP39-208ENST00000455732 TMEM9BQ9NQ34 198 aa17.74■□□□□ 0.43
USP39-208ENST00000455732 NDFIP2Q9NV92 336 aa17.74■□□□□ 0.43
USP39-208ENST00000455732 SLC6A14Q9UN76 642 aa17.74■□□□□ 0.43
USP39-208ENST00000455732 AP4E1Q9UPM8 1137 aa17.74■□□□□ 0.43
USP39-208ENST00000455732 METTL12A8MUP2 240 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 AKR1B15C9JRZ8 316 aaPredicted RBP17.73■□□□□ 0.43
USP39-208ENST00000455732 ALOX15BO15296 676 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 FGF10O15520 208 aaPredicted RBP17.73■□□□□ 0.43
USP39-208ENST00000455732 PRPSAP2O60256 369 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 RAMP2O60895 175 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 MT-CO1P00395 513 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 VAV1P15498 845 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 ENGP17813 658 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 KCNA4P22459 653 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 MAOBP27338 520 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 ACSL1P33121 698 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 ZNF135P52742 658 aaPredicted RBP17.73■□□□□ 0.43
USP39-208ENST00000455732 GALCP54803 685 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 ADKP55263 362 aaKnown RBP17.73■□□□□ 0.43
USP39-208ENST00000455732 SLC20A2Q08357 652 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 SFSWAPQ12872 951 aaKnown RBP17.73■□□□□ 0.43
USP39-208ENST00000455732 PIGHQ14442 188 aaPredicted RBP17.73■□□□□ 0.43
USP39-208ENST00000455732 DLG2Q15700 870 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 CST6Q15828 149 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 SYCP2LQ5T4T6 812 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 ERMARDQ5T6L9 678 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 RETSATQ6NUM9 610 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 RABEPKQ7Z6M1 372 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 STK40Q8N2I9 435 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 ARHGEF26Q96DR7 871 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 CNTNAP3BQ96NU0 1288 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 SNRNP25Q9BV90 132 aaKnown RBP17.73■□□□□ 0.43
USP39-208ENST00000455732 NUP85Q9BW27 656 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 CNTNAP3Q9BZ76 1288 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 DEF6Q9H4E7 631 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 CATSPERBQ9H7T0 1116 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 ATP13A1Q9HD20 1204 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 DONSONQ9NYP3 566 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 CACNA1BQ00975 2339 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 TP53BP1Q12888 1972 aaPredicted RBP17.73■□□□□ 0.43
USP39-208ENST00000455732 DOCK9Q9BZ29 2069 aa17.73■□□□□ 0.43
USP39-208ENST00000455732 CBX4O00257 560 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 CREB3O43889 395 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 ADH1BP00325 375 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 CFIP05156 583 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 GLDCP23378 1020 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 SERPINH1P50454 418 aaKnown RBP17.72■□□□□ 0.43
USP39-208ENST00000455732 ARF5P84085 180 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 WDR45BQ5MNZ6 344 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 Q6ZVU0 165 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 DSG4Q86SJ6 1040 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 FAM124AQ86V42 546 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 GAS2L3Q86XJ1 694 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 MMAAQ8IVH4 418 aaKnown RBP17.72■□□□□ 0.43
USP39-208ENST00000455732 RGL4Q8IZJ4 473 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 ATP11CQ8NB49 1132 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 OR8D1Q8WZ84 308 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 ARHGEF2Q92974 986 aaKnown RBP17.72■□□□□ 0.43
USP39-208ENST00000455732 MRFAP1L1Q96HT8 127 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 SPON2Q9BUD6 331 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 CEP44Q9C0F1 390 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 SGK2Q9HBY8 427 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 FSCN3Q9NQT6 498 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 UVRAGQ9P2Y5 699 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 PCSK1NQ9UHG2 260 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 IP6K2Q9UHH9 426 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 DNAI1Q9UI46 699 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 ANAPC7Q9UJX3 599 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 FZD4Q9ULV1 537 aa17.72■□□□□ 0.43
USP39-208ENST00000455732 PLXNA2O75051 1894 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 CABIN1Q9Y6J0 2220 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 MCF2LO15068 1137 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 AKR1B10O60218 316 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 ADRB1P08588 477 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 C5AR1P21730 350 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 ACVRL1P37023 503 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 GEMIN4P57678 1058 aaKnown RBP17.71■□□□□ 0.43
USP39-208ENST00000455732 TPI1P60174 286 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 CA9Q16790 459 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 ACCSLQ4AC99 568 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 DCAF12L1Q5VU92 463 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 C22orf39Q6P5X5 142 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 LINGO4Q6UY18 593 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 UMODL1-AS1Q8N2C9 162 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 C1orf216Q8TAB5 229 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 CTNNBL1Q8WYA6 563 aaPredicted RBP17.71■□□□□ 0.43
USP39-208ENST00000455732 FAM131CQ96AQ9 280 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 CCDC114Q96M63 670 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 KCTD15Q96SI1 283 aaPredicted RBP17.71■□□□□ 0.43
USP39-208ENST00000455732 CHP1Q99653 195 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 BTBD1Q9H0C5 482 aa17.71■□□□□ 0.43
USP39-208ENST00000455732 DHX35Q9H5Z1 703 aaKnown RBP17.71■□□□□ 0.43
USP39-208ENST00000455732 NOL6Q9H6R4 1146 aaKnown RBP17.71■□□□□ 0.43
USP39-208ENST00000455732 NHEJ1Q9H9Q4 299 aaPredicted RBP17.71■□□□□ 0.43
USP39-208ENST00000455732 GPATCH2LQ9NWQ4 482 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms