RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 GSDMAQ96QA5 445 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 CDK5RAP1Q96SZ6 601 aaKnown RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 DPH2Q9BQC3 489 aaPredicted RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 DCLK3Q9C098 648 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 DNAI2Q9GZS0 605 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 MIS12Q9H081 205 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 SLC32A1Q9H598 525 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 C6orf106Q9H6K1 298 aaPredicted RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 CYP4F12Q9HCS2 524 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 ABCB8Q9NUT2 735 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 HESX1Q9UBX0 185 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 REV1Q9UBZ9 1251 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 ARMCX3Q9UH62 379 aaPredicted RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 EIF2B4Q9UI10 523 aaKnown RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 MAN1B1Q9UKM7 699 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 STRIP2Q9ULQ0 834 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 NAALADL1Q9UQQ1 740 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 SLC27A6Q9Y2P4 619 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 COQ4Q9Y3A0 265 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 ATP6V1DQ9Y5K8 247 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 EPG5Q9HCE0 2579 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 CHD8Q9HCK8 2581 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 PLXNA2O75051 1894 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 ADAMTS20P59510 1910 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 LAMA1P25391 3075 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 SPEGQ15772 3267 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 TAF4O00268 1085 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 BCAT2O15382 392 aaPredicted RBP4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 SLC16A3O15427 465 aaKnown RBP4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 TIMM44O43615 452 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 STX10O60499 249 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 TBL1XO60907 577 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 RNGTTO60942 597 aaKnown RBP4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 GJB3O75712 270 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 SMC2O95347 1197 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 FYNP06241 537 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 ACADMP11310 421 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 GNSP15586 552 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 CD70P32970 193 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 PREPP48147 710 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 BCAT1P54687 386 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 DAOAP59103 153 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 RPS24P62847 133 aaKnown RBP4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 INSM1Q01101 510 aaPredicted RBP4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 BNC1Q01954 994 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 APBA1Q02410 837 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 ENPEPQ07075 957 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 GRIK2Q13002 908 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 ENPP2Q13822 863 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 COL9A2Q14055 689 aaPredicted RBP4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 TRIP6Q15654 476 aaKnown RBP4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 CNGA2Q16280 664 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 PPP2R5EQ16537 467 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 CCDC40Q4G0X9 1142 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 FNDC3BQ53EP0 1204 aaKnown RBP4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 KCNT1Q5JUK3 1230 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 WDR45BQ5MNZ6 344 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 PRAMEF14Q5SWL7 426 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 SYCP2LQ5T4T6 812 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 ADGRF1Q5T601 910 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 ZBTB37Q5TC79 503 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 SYPL2Q5VXT5 272 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 MBLAC2Q68D91 279 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 NADSYN1Q6IA69 706 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 GJB7Q6PEY0 223 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 LCLAT1Q6UWP7 414 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 LAYNQ6UX15 382 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 MMS22LQ6ZRQ5 1243 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 ANKS1BQ7Z6G8 1248 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 SLCO6A1Q86UG4 719 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 ADIPOR2Q86V24 386 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 ARHGEF19Q8IW93 802 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 FAM217AQ8IXS0 508 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 SIX6OS1Q8N1H7 587 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 CFAP52Q8N1V2 620 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 PPM1KQ8N3J5 372 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 TTC39CQ8N584 583 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 SPATA20Q8TB22 786 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 SETD7Q8WTS6 366 aaKnown RBP4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 NELFBQ8WX92 580 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 KCTD13Q8WZ19 329 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 DNASE2BQ8WZ79 361 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 SNX19Q92543 992 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 GATA6Q92908 595 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 DHTKD1Q96HY7 919 aaPredicted RBP4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 FAXDC2Q96IV6 333 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 KREMEN1Q96MU8 473 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 NT5C1BQ96P26 610 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 NUP58Q9BVL2 599 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 SLC2A11Q9BYW1 496 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 TMEM245Q9H330 911 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 GAREM1Q9H706 876 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 AKTIPQ9H8T0 292 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 FBRSQ9HAH7 460 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 ACP6Q9NPH0 428 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 PRSS16Q9NQE7 514 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 ST7Q9NRC1 585 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 ABCC13Q9NSE7 274 aa4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 OLA1Q9NTK5 396 aaKnown RBP4.87□□□□□ -1.63
GTF3C3-208ENST00000455546 RMND1Q9NWS8 449 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms