RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 EPS8L3Q8TE67 593 aaKnown RBP6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 FBF1Q8TES7 1133 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 FEM1CQ96JP0 617 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 XPO6Q96QU8 1125 aaKnown RBP6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 SMC6Q96SB8 1091 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 CPNE1Q99829 537 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 LRRC3Q9BY71 257 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 ACE2Q9BYF1 805 aaPredicted RBP6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 POLR1EQ9GZS1 481 aaKnown RBP6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 FAM107BQ9H098 131 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 NSRP1Q9H0G5 558 aaKnown RBP6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 NOL6Q9H6R4 1146 aaKnown RBP6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 CCSER2Q9H7U1 834 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 SP110Q9HB58 689 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 TRPC7Q9HCX4 862 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 ATP13A1Q9HD20 1204 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 ASAH2Q9NR71 780 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 TBC1D14Q9P2M4 693 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 HCSTQ9UBK5 93 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 VANGL2Q9ULK5 521 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 NR2E3Q9Y5X4 410 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 ATXN2Q99700 1313 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 TCRBV7S3A2A0A539 114 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 TLDC2A0PJX2 215 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 CCDC189A1A4V9 331 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 FAM47DPA6NHR8 397 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 DFFAO00273 331 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 SLC9A3R1O14745 358 aaPredicted RBP6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 TGM5O43548 720 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 PEX11BO96011 259 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 JCHAINP01591 159 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 ACRP10323 421 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 ALADP13716 330 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 HLA-DPA1P20036 260 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 ADRA1DP25100 572 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 PSMA3P25788 255 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 OR1E1P30953 314 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 CORO1AP31146 461 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 CD68P34810 354 aaPredicted RBP6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 PGFP49763 221 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 RABGGTBP53611 331 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 RPL26P61254 145 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 ERVK-21P61565 698 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 PDE1BQ01064 536 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 SLC18A2Q05940 514 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 DMC1Q14565 340 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 E2F5Q15329 346 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 INSCQ1MX18 579 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 MSS51Q4VC12 460 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 MPPE1Q53F39 396 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 PPM1LQ5SGD2 360 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 GRTP1Q5TC63 336 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 SDHAF4Q5VUM1 108 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 PDPK2PQ6A1A2 396 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 NADSYN1Q6IA69 706 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 B4GALNT4Q76KP1 1039 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 C14orf80Q86SX3 495 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 MIB1Q86YT6 1006 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 TMC8Q8IU68 726 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 CALML6Q8TD86 181 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 DCAKDQ8WVC6 231 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 ATXN2LQ8WWM7 1075 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 ACDQ96AP0 544 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 PSKH2Q96QS6 385 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 PAFAH2Q99487 392 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 TBL1YQ9BQ87 522 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 SLC2A11Q9BYW1 496 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 CENPHQ9H3R5 247 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 PDFQ9HBH1 243 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 TMPRSS4Q9NRS4 437 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 RBM22Q9NW64 420 aaKnown RBP eCLIP6.96□□□□□ -1.37e-6■■■■□ 24.6
ECHDC1-210ENST00000454859 BCCIPQ9P287 314 aaKnown RBP eCLIP6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 MAGED2Q9UNF1 606 aaPredicted RBP6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 RPL26L1Q9UNX3 145 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 TTLL3Q9Y4R7 772 aa6.96□□□□□ -1.3
ECHDC1-210ENST00000454859 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 A0A1W2PQ67 120 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 HEATR9A2RTY3 570 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 H3BNC9 293 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 MOCS2O96007 188 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 IL1BP01584 269 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 FGF1P05230 155 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 C8AP07357 584 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 GSTA1P08263 222 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 HDCP19113 662 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 NFKB1P19838 968 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 LSP1P33241 339 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 CTNNB1P35222 781 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 CLCN4P51793 760 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 IL9RQ01113 521 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 ZBTB17Q13105 803 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 LBRQ14739 615 aaKnown RBP6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 LONRF1Q17RB8 773 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 RAP1GAP2Q684P5 730 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 RANBP10Q6VN20 620 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 UNC5AQ6ZN44 842 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 TMEM150AQ86TG1 271 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 PLPP6Q8IY26 295 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 LGI2Q8N0V4 545 aa6.95□□□□□ -1.3
ECHDC1-210ENST00000454859 PDCD7Q8N8D1 485 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms