RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 EME1Q96AY2 570 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 MIPEPQ99797 713 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 LRMDAQ9H2I8 198 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 USP29Q9HBJ7 922 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 CLIC5Q9NZA1 410 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 HACD3Q9P035 362 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 THEGQ9P2T0 379 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 SOX13Q9UN79 622 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 TEX264Q9Y6I9 313 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 A0A1B0GVG6 124 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 RRN3P2A6NIE6 340 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 ATG7O95352 703 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 GM2AP17900 193 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 ADRA1BP35368 520 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 FDFT1P37268 417 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 NEK3P51956 506 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 ZNF132P52740 706 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 MRPS5P82675 430 aaKnown RBP11.36□□□□□ -0.59
DDR1-240ENST00000454612 FAM83EQ2M2I3 478 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 PPM1LQ5SGD2 360 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 OSTM1Q86WC4 334 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 PCED1BQ96HM7 432 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 PALMDQ9NP74 551 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 ACOT9Q9Y305 439 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 SERPINE1P05121 402 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 USP46P62068 366 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 ZNF235Q14590 738 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 FAM219BQ5XKK7 198 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 OVOS1Q6IE37 1185 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 ESRP1Q6NXG1 681 aaKnown RBP11.36□□□□□ -0.59
DDR1-240ENST00000454612 ARHGAP36Q6ZRI8 547 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 PHTF2Q8N3S3 785 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 PPHLN1Q8NEY8 458 aaKnown RBP11.36□□□□□ -0.59
DDR1-240ENST00000454612 SLC7A6OSQ96CW6 309 aaPredicted RBP11.36□□□□□ -0.59
DDR1-240ENST00000454612 CMTM5Q96DZ9 223 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 C12orf42Q96LP6 360 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 NPAS2Q99743 824 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 Q9H521 79 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 COG4Q9H9E3 785 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 GPAMQ9HCL2 828 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 DCDC2Q9UHG0 476 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 ARHGAP26Q9UNA1 814 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 PCDHA11Q9Y5I1 949 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 SNX13Q9Y5W8 968 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 KIAA0100Q14667 2235 aaKnown RBP11.35□□□□□ -0.59
DDR1-240ENST00000454612 OR51F1A6NGY5 319 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 TRIM13O60858 407 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 PIGRP01833 764 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 S100BP04271 92 aaPredicted RBP11.35□□□□□ -0.59
DDR1-240ENST00000454612 NOS2P35228 1153 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 GRIA4P48058 902 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 ADARP55265 1226 aaKnown RBP11.35□□□□□ -0.59
DDR1-240ENST00000454612 GHRHRQ02643 423 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 PDAP1Q13442 181 aaKnown RBP11.35□□□□□ -0.59
DDR1-240ENST00000454612 SEL1L3Q68CR1 1132 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 KLC3Q6P597 504 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 AFAP1L2Q8N4X5 818 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 ATAD1Q8NBU5 361 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 PDZD8Q8NEN9 1154 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 NPLOC4Q8TAT6 608 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 SHKBP1Q8TBC3 707 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 XPR1Q9UBH6 696 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 HBS1LQ9Y450 684 aaKnown RBP11.35□□□□□ -0.59
DDR1-240ENST00000454612 SSC5DA1L4H1 1573 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 A6NHS1 94 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.35□□□□□ -0.59
DDR1-240ENST00000454612 AKAP10O43572 662 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 LRIG2O94898 1065 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 MT-ND1P03886 318 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 T-ENOLP0DO92 83 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 DARSP14868 501 aaKnown RBP11.35□□□□□ -0.59
DDR1-240ENST00000454612 STMN1P16949 149 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 PAX3P23760 479 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 GRM5P41594 1212 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 TWF1Q12792 350 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 PTPRCAPQ14761 206 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 GRM3Q14832 879 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 FSCN1Q16658 493 aaKnown RBP11.35□□□□□ -0.59
DDR1-240ENST00000454612 DNAL1Q4LDG9 190 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 FSTL4Q6MZW2 842 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 TTC39CQ8N584 583 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 ZNF512Q96ME7 567 aaPredicted RBP11.35□□□□□ -0.59
DDR1-240ENST00000454612 ABCG8Q9H221 673 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 CAAP1Q9H8G2 361 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 FARP1Q9Y4F1 1045 aaPredicted RBP11.35□□□□□ -0.59
DDR1-240ENST00000454612 CEP290O15078 2479 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 SH3BGRLO75368 114 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 KLHL2O95198 593 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 ATN1P54259 1190 aaPredicted RBP11.35□□□□□ -0.59
DDR1-240ENST00000454612 CCDC80Q76M96 950 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 DENND1AQ8TEH3 1009 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 GDPD5Q8WTR4 605 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 MYLPFQ96A32 169 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 PARK7Q99497 189 aaKnown RBP11.35□□□□□ -0.59
DDR1-240ENST00000454612 ZNF670Q9BS34 389 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 LRCH1Q9Y2L9 728 aa11.35□□□□□ -0.59
DDR1-240ENST00000454612 MOXD2PA6NHM9 499 aa11.34□□□□□ -0.59
DDR1-240ENST00000454612 ZBTB42B2RXF5 422 aa11.34□□□□□ -0.59
DDR1-240ENST00000454612 F8W810 466 aa11.34□□□□□ -0.59
DDR1-240ENST00000454612 ACADSP16219 412 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms