RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 MANEALQ5VSG8 457 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 CYS1Q717R9 158 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 TMCO2Q7Z6W1 182 aaPredicted RBP11.99□□□□□ -0.49
VTA1-203ENST00000452973 PARP9Q8IXQ6 854 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 CFAP52Q8N1V2 620 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 BCL7CQ8WUZ0 217 aaPredicted RBP11.99□□□□□ -0.49
VTA1-203ENST00000452973 PRR11Q96HE9 360 aaPredicted RBP11.99□□□□□ -0.49
VTA1-203ENST00000452973 NACA2Q9H009 215 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 TMEM216Q9P0N5 145 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 SLC39A10Q9ULF5 831 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 PHF24Q9UPV7 400 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 USP1O94782 785 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 UNC5CO95185 931 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 BPGMP07738 259 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 GALTP07902 379 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 SPRP35270 261 aaPredicted RBP11.98□□□□□ -0.49
VTA1-203ENST00000452973 NPY2RP49146 381 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 MPP3Q13368 585 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 ATG16L1Q676U5 607 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 RAPH1Q70E73 1250 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 LZTR1Q8N653 840 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 PNPLA1Q8N8W4 532 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 IGSF8Q969P0 613 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 CPNE1Q99829 537 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 ACSS2Q9NR19 701 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 TLR8Q9NR97 1041 aaKnown RBP11.98□□□□□ -0.49
VTA1-203ENST00000452973 VWA8A3KMH1 1905 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.98□□□□□ -0.49
VTA1-203ENST00000452973 AVPR1AP37288 418 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 IRF9Q00978 393 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 SLC10A7Q0GE19 358 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 STX3Q13277 289 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 CTBP1Q13363 440 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 FBXL22Q6P050 247 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 CCDC91Q7Z6B0 441 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 LINC00523Q86TU6 105 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 TTC7BQ86TV6 843 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 PLD6Q8N2A8 252 aaKnown RBP11.98□□□□□ -0.49
VTA1-203ENST00000452973 DPF3Q92784 378 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 PSMG2Q969U7 264 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 UNKQ9C0B0 810 aaKnown RBP11.98□□□□□ -0.49
VTA1-203ENST00000452973 ZYG11BQ9C0D3 744 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 NOL6Q9H6R4 1146 aaKnown RBP11.98□□□□□ -0.49
VTA1-203ENST00000452973 KCNK13Q9HB14 408 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 CD248Q9HCU0 757 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.98□□□□□ -0.49
VTA1-203ENST00000452973 ARMCX1Q9P291 453 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 CPSF2Q9P2I0 782 aaKnown RBP11.98□□□□□ -0.49
VTA1-203ENST00000452973 SLC2A6Q9UGQ3 507 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 EMCNQ9ULC0 261 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 OR6C75A6NL08 312 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 ANXA9O76027 345 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 DLDP09622 509 aaKnown RBP11.98□□□□□ -0.49
VTA1-203ENST00000452973 SLC2A3P11169 496 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 OR1D2P34982 312 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 ALDH7A1P49419 539 aaKnown RBP11.98□□□□□ -0.49
VTA1-203ENST00000452973 CDK7P50613 346 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 KCNQ1P51787 676 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 SPOUT1Q5T280 376 aaKnown RBP11.98□□□□□ -0.49
VTA1-203ENST00000452973 GRTP1Q5TC63 336 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 ESRP1Q6NXG1 681 aaKnown RBP11.98□□□□□ -0.49
VTA1-203ENST00000452973 SLC39A13Q96H72 371 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 TSGA13Q96PP4 275 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 RBBP8Q99708 897 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 TTPALQ9BTX7 342 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 RNF208Q9H0X6 261 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 HIPK3Q9H422 1215 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 SP110Q9HB58 689 aa11.98□□□□□ -0.49
VTA1-203ENST00000452973 SCAMP3O14828 347 aaKnown RBP11.97□□□□□ -0.49
VTA1-203ENST00000452973 TLR5O60602 858 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 GLRA3O75311 464 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 VNN2O95498 520 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 FGFR3P22607 806 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 GPR17Q13304 367 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 KIAA1841Q6NSI8 718 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 RFWD3Q6PCD5 774 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.97□□□□□ -0.49
VTA1-203ENST00000452973 TIFABQ6ZNK6 161 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 CLNKQ7Z7G1 428 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 ALYREFQ86V81 257 aaKnown RBP11.97□□□□□ -0.49
VTA1-203ENST00000452973 NPAS4Q8IUM7 802 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 C10orf107Q8IVU9 208 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 SPNS2Q8IVW8 549 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 DENND6AQ8IWF6 608 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 ARHGAP18Q8N392 663 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 ATP6V0D2Q8N8Y2 350 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 APBB2Q92870 758 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 MYEOVQ96EZ4 313 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 ZNF512Q96ME7 567 aaPredicted RBP11.97□□□□□ -0.49
VTA1-203ENST00000452973 RILPQ96NA2 401 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 IL12RB2Q99665 862 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 TXLNGQ9NUQ3 528 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 SOX13Q9UN79 622 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 ITM2AO43736 263 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 CD86P42081 329 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 AQP5P55064 265 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 MRPL58Q14197 206 aaKnown RBP11.97□□□□□ -0.49
VTA1-203ENST00000452973 CNGA3Q16281 694 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 CRLF3Q8IUI8 442 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 TRIM42Q8IWZ5 723 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms