RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 WDTC1Q8N5D0 677 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 DCBLD1Q8N8Z6 715 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 DCAF4L2Q8NA75 395 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 C1orf131Q8NDD1 294 aaKnown RBP11.17□□□□□ -0.62
USP1-204ENST00000452143 OR52K2Q8NGK3 314 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 SNIP1Q8TAD8 396 aaKnown RBP11.17□□□□□ -0.62
USP1-204ENST00000452143 BAP1Q92560 729 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 BBC3Q96PG8 261 aaPredicted RBP11.17□□□□□ -0.62
USP1-204ENST00000452143 CRACR2AQ9BSW2 395 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 MUC3BQ9H195 1237 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 SYNCQ9H7C4 482 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 RWDD2AQ9UIY3 292 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 STAP1Q9ULZ2 295 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 TRPM6Q9BX84 2022 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 ASH1LQ9NR48 2969 aaKnown RBP11.17□□□□□ -0.62
USP1-204ENST00000452143 SHROOM3Q8TF72 1996 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 MGAQ8IWI9 3026 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 M0QYT0 321 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 RRP8O43159 456 aaKnown RBP11.16□□□□□ -0.62
USP1-204ENST00000452143 GRAP2O75791 330 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 PRNPP04156 253 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 ERBB2P04626 1255 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 SRCP12931 536 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 SLC9A1P19634 815 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 NUMBP49757 651 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 IRAK1P51617 712 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 SLC6A3Q01959 620 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 PTK2Q05397 1052 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 ZNF211Q13398 564 aaPredicted RBP11.16□□□□□ -0.62
USP1-204ENST00000452143 PTPN20Q4JDL3 420 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 OTUD1Q5VV17 481 aaPredicted RBP11.16□□□□□ -0.62
USP1-204ENST00000452143 OR6B2Q6IFH4 312 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 SETD3Q86TU7 594 aaPredicted RBP11.16□□□□□ -0.62
USP1-204ENST00000452143 ATP11CQ8NB49 1132 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 TMIEQ8NEW7 156 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 FAM174AQ8TBP5 190 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 PGAP3Q96FM1 320 aaPredicted RBP11.16□□□□□ -0.62
USP1-204ENST00000452143 KLHDC7BQ96G42 594 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 PPP1R16AQ96I34 528 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 NPY6RQ99463 290 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 DYRK4Q9NR20 520 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 PIGVQ9NUD9 493 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 ARHGEF38Q9NXL2 777 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 CLCA2Q9UQC9 943 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 AK5Q9Y6K8 562 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 ZNF462Q96JM2 2506 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 TDRD6O60522 2096 aaKnown RBP11.16□□□□□ -0.62
USP1-204ENST00000452143 CHD5Q8TDI0 1954 aa11.16□□□□□ -0.62
USP1-204ENST00000452143 ATMQ13315 3056 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 TK2O00142 265 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 KPNA3O00505 521 aaPredicted RBP11.15□□□□□ -0.62
USP1-204ENST00000452143 F9P00740 461 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 CTSLP07711 333 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 RHOCP08134 193 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 THEGLP0DJG4 465 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 HNRNPA2B1P22626 353 aaKnown RBP11.15□□□□□ -0.62
USP1-204ENST00000452143 GLDCP23378 1020 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 CHRNA3P32297 505 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 KRT9P35527 623 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 SCNN1AP37088 669 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 GGCXP38435 758 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 CXCR3P49682 368 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 CLDN6P56747 220 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 E2F1Q01094 437 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 INSM1Q01101 510 aaPredicted RBP11.15□□□□□ -0.62
USP1-204ENST00000452143 SEMG2Q02383 582 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 KCNMA1Q12791 1236 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 POM121L1PQ3SYA9 428 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 C22orf39Q6P5X5 142 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 HORMAD1Q86X24 394 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 OR2A12Q8NGT7 310 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 OR4C6Q8NH72 309 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 NT5C3BQ969T7 300 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 IFT43Q96FT9 208 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 CRELD1Q96HD1 420 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 HDAC8Q9BY41 377 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 TKTL2Q9H0I9 626 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 WDCPQ9H6R7 721 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 KLHL11Q9NVR0 708 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 VPS51Q9UID3 782 aa11.15□□□□□ -0.62
USP1-204ENST00000452143 IGLV3-10A0A075B6K4 115 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 CXorf51AA0A1B0GTR3 108 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 A0A1W2PQU0 124 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 TRIM38O00635 465 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 SIGLEC6O43699 453 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 TLX3O43711 291 aaPredicted RBP11.14□□□□□ -0.63
USP1-204ENST00000452143 BNIP3LO60238 219 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 SDC3O75056 442 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 ALPPL2P10696 532 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 PRKCSHP14314 528 aaPredicted RBP11.14□□□□□ -0.63
USP1-204ENST00000452143 DGKAP23743 735 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 PON1P27169 355 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 AKT2P31751 481 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 ACTN2P35609 894 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 RECQLP46063 649 aaPredicted RBP11.14□□□□□ -0.63
USP1-204ENST00000452143 SULT1E1P49888 294 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 BPIFB4P59827 614 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 DAB2P98082 770 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 ZNF284Q2VY69 593 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 ALFQ53S48 1182 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms