RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 CCDC114Q96M63 670 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 MYOCQ99972 504 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 HAUS4Q9H6D7 363 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 GPATCH2LQ9NWQ4 482 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 ANGPTL2Q9UKU9 493 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 FZD4Q9ULV1 537 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 FNDC3AQ9Y2H6 1198 aaKnown RBP9.91□□□□□ -0.82
USP54-207ENST00000451492 FCF1Q9Y324 198 aaKnown RBP9.91□□□□□ -0.82
USP54-207ENST00000451492 SNX11Q9Y5W9 270 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 CACNA1EQ15878 2313 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 SHROOM3Q8TF72 1996 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 FRYQ5TBA9 3013 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 A0A1B0GTH6 734 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 GOLGA8CPA6NN73 597 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 GOLGA6L19H0YKK7 550 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 RNF103O00237 685 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 LRIG2O94898 1065 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 PLEKP08567 350 aaPredicted RBP9.9□□□□□ -0.82
USP54-207ENST00000451492 CEACAM1P13688 526 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 CD59P13987 128 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 GOT1P17174 413 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 CSRP1P21291 193 aaKnown RBP9.9□□□□□ -0.82
USP54-207ENST00000451492 CD27P26842 260 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 PMLP29590 882 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 GSCP56915 257 aaPredicted RBP9.9□□□□□ -0.82
USP54-207ENST00000451492 C21orf59P57076 290 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 FANCCQ00597 558 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 GNA12Q03113 381 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 KLHL30Q0D2K2 578 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 SEMA3BQ13214 749 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 KIF19Q2TAC6 998 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 HLA-BQ31612 363 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 TDRD12Q587J7 1177 aaKnown RBP9.9□□□□□ -0.82
USP54-207ENST00000451492 EFHC2Q5JST6 749 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 ACAD10Q6JQN1 1059 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 ARCQ7LC44 396 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 IRF2BP2Q7Z5L9 587 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 SLFN11Q7Z7L1 901 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 MCOLN2Q8IZK6 566 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 RYBPQ8N488 228 aaPredicted RBP9.9□□□□□ -0.82
USP54-207ENST00000451492 NETO2Q8NC67 525 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 OR6K2Q8NGY2 324 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 C1orf216Q8TAB5 229 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 KLK6Q92876 244 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 ARRDC3Q96B67 414 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 ZNF653Q96CK0 615 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 SERAC1Q96JX3 654 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 C1orf74Q96LT6 269 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 TM6SF2Q9BZW4 377 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 PCED1AQ9H1Q7 454 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 ZDHHC6Q9H6R6 413 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 EBF2Q9HAK2 575 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 DYRK4Q9NR20 520 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 TM7SF3Q9NS93 570 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 DNAAF2Q9NVR5 837 aaKnown RBP9.9□□□□□ -0.82
USP54-207ENST00000451492 MYO1AQ9UBC5 1043 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 NEU3Q9UQ49 428 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 HS3ST2Q9Y278 367 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 ANKRD6Q9Y2G4 727 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 FARP1Q9Y4F1 1045 aaPredicted RBP9.9□□□□□ -0.82
USP54-207ENST00000451492 PCDHB9Q9Y5E1 797 aa9.9□□□□□ -0.82
USP54-207ENST00000451492 TDRD6O60522 2096 aaKnown RBP9.89□□□□□ -0.83
USP54-207ENST00000451492 NCOR2Q9Y618 2525 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 LRRK1Q38SD2 2015 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 PTPRBP23467 1997 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 A0A1W2PPC4 97 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 ILVBLA1L0T0 632 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 SIGLEC16A6NMB1 481 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 WNT9AO14904 365 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 MCF2LO15068 1137 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 LEFTY1O75610 366 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 GJB3O75712 270 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 DESP17661 470 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 PSMA2P25787 234 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 CHRNA3P32297 505 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 RECQLP46063 649 aaPredicted RBP9.89□□□□□ -0.83
USP54-207ENST00000451492 GRIA4P48058 902 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 SERPINH1P50454 418 aaKnown RBP9.89□□□□□ -0.83
USP54-207ENST00000451492 ZNF143P52747 638 aaPredicted RBP9.89□□□□□ -0.83
USP54-207ENST00000451492 ARF5P84085 180 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 OGDHQ02218 1023 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 KCNT1Q5JUK3 1230 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 PRAMEF14Q5SWL7 426 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 ARTNQ5T4W7 220 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 ACBD5Q5T8D3 534 aaPredicted RBP9.89□□□□□ -0.83
USP54-207ENST00000451492 MANEALQ5VSG8 457 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 AGBL4Q5VU57 503 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 FAM46CQ5VWP2 391 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 DPY19L3Q6ZPD9 716 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 ZNF571Q7Z3V5 609 aaPredicted RBP9.89□□□□□ -0.83
USP54-207ENST00000451492 TMC6Q7Z403 805 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 PIP4P1Q86T03 277 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 OR2A12Q8NGT7 310 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 CPLX3Q8WVH0 158 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 ACE2Q9BYF1 805 aaPredicted RBP9.89□□□□□ -0.83
USP54-207ENST00000451492 ZDHHC5Q9C0B5 715 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 FZD3Q9NPG1 666 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 PPARGC1AQ9UBK2 798 aaKnown RBP9.89□□□□□ -0.83
USP54-207ENST00000451492 ZNF212Q9UDV6 495 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 IL36AQ9UHA7 158 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms