RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 OR14C36Q8NHC7 312 aa7.58□□□□□ -1.2
RBM39-218ENST00000449489 IFI44Q8TCB0 444 aa7.58□□□□□ -1.2
RBM39-218ENST00000449489 TMA16Q96EY4 203 aaKnown RBP7.58□□□□□ -1.2
RBM39-218ENST00000449489 MRGPRX3Q96LB0 322 aa7.58□□□□□ -1.2
RBM39-218ENST00000449489 EPN3Q9H201 632 aa7.58□□□□□ -1.2
RBM39-218ENST00000449489 RUBCNLQ9H714 662 aa7.58□□□□□ -1.2
RBM39-218ENST00000449489 SMYD3Q9H7B4 428 aa7.58□□□□□ -1.2
RBM39-218ENST00000449489 LRRC4CQ9HCJ2 640 aa7.58□□□□□ -1.2
RBM39-218ENST00000449489 UCKL1Q9NWZ5 548 aa7.58□□□□□ -1.2
RBM39-218ENST00000449489 MARCH2Q9P0N8 246 aa7.58□□□□□ -1.2
RBM39-218ENST00000449489 RASAL2Q9UJF2 1139 aa7.58□□□□□ -1.2
RBM39-218ENST00000449489 SALL4Q9UJQ4 1053 aa7.58□□□□□ -1.2
RBM39-218ENST00000449489 HBS1LQ9Y450 684 aaKnown RBP7.58□□□□□ -1.2
RBM39-218ENST00000449489 CSNK1G3Q9Y6M4 447 aa7.58□□□□□ -1.2
RBM39-218ENST00000449489 SCN8AQ9UQD0 1980 aa7.58□□□□□ -1.2
RBM39-218ENST00000449489 TRPM6Q9BX84 2022 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 CCDC168Q8NDH2 2452 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 EDDM13A0A1B0GTR0 161 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 BLACEA4D250 179 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 SLC35F4A4IF30 521 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 TMX2-CTNND1H3BSU7 103 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 K7ESM1 405 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 NVLO15381 856 aaKnown RBP7.57□□□□□ -1.2
RBM39-218ENST00000449489 IRAK2O43187 625 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 PLRG1O43660 514 aaKnown RBP7.57□□□□□ -1.2
RBM39-218ENST00000449489 KRT38O76015 456 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 FAM157BP0CG42 384 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 DLATP10515 647 aaKnown RBP7.57□□□□□ -1.2
RBM39-218ENST00000449489 LIPCP11150 499 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 P4HA1P13674 534 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 CCDC130P13994 396 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 DRD3P35462 400 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 CD97P48960 835 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 NDST1P52848 882 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 HNRNPKP61978 463 aaKnown RBP eCLIP7.57□□□□□ -1.2
RBM39-218ENST00000449489 PPP2CBP62714 309 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 PPP2CAP67775 309 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 TYRO3Q06418 890 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 CYP24A1Q07973 514 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 ELAVL3Q14576 367 aaKnown RBP7.57□□□□□ -1.2
RBM39-218ENST00000449489 SETMARQ53H47 684 aaPredicted RBP7.57□□□□□ -1.2
RBM39-218ENST00000449489 ZNF667Q5HYK9 610 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 FOXR1Q6PIV2 292 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 STXBP4Q6ZWJ1 553 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 MMAAQ8IVH4 418 aaKnown RBP7.57□□□□□ -1.2
RBM39-218ENST00000449489 C12orf29Q8N999 325 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 ZSCAN1Q8NBB4 408 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 RASSF8Q8NHQ8 419 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 FIBINQ8TAL6 211 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 SPATA20Q8TB22 786 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 NOC3LQ8WTT2 800 aaKnown RBP7.57□□□□□ -1.2
RBM39-218ENST00000449489 TAF4BQ92750 862 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 ZSCAN31Q96LW9 406 aaPredicted RBP7.57□□□□□ -1.2
RBM39-218ENST00000449489 NUCKS1Q9H1E3 243 aaKnown RBP7.57□□□□□ -1.2
RBM39-218ENST00000449489 OSBPL2Q9H1P3 480 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 OLA1Q9NTK5 396 aaKnown RBP7.57□□□□□ -1.2
RBM39-218ENST00000449489 TBC1D7Q9P0N9 293 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 SEPT10Q9P0V9 454 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 PLEKHB1Q9UF11 243 aaPredicted RBP7.57□□□□□ -1.2
RBM39-218ENST00000449489 PCDHGC4Q9Y5F7 938 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 PCNX1Q96RV3 2341 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 SPG11Q96JI7 2443 aa7.57□□□□□ -1.2
RBM39-218ENST00000449489 UBE4BO95155 1302 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 CSMD2Q7Z408 3487 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 NYNRINQ9P2P1 1898 aaKnown RBP7.56□□□□□ -1.2
RBM39-218ENST00000449489 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.56□□□□□ -1.2
RBM39-218ENST00000449489 TPP1O14773 563 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 PLD2O14939 933 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 FFAR2O15552 330 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 HMBSP08397 361 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 SLC5A2P31639 672 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 CD70P32970 193 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 IRX6P78412 446 aaPredicted RBP7.56□□□□□ -1.2
RBM39-218ENST00000449489 INCA1Q0VD86 236 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 ZNF177Q13360 481 aaPredicted RBP7.56□□□□□ -1.2
RBM39-218ENST00000449489 NCAPHQ15003 741 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 ZNF699Q32M78 642 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 RAB41Q5JT25 222 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 PIK3R6Q5UE93 754 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 PM20D1Q6GTS8 502 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 NEK5Q6P3R8 708 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 SV2BQ7L1I2 683 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 AZIN2Q96A70 460 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 CYFIP2Q96F07 1278 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 FUCA2Q9BTY2 467 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 DUSP16Q9BY84 665 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 B3GNT4Q9C0J1 378 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 SDCBP2Q9H190 292 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 MTG2Q9H4K7 406 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 PREBQ9HCU5 417 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 BRD7Q9NPI1 651 aa7.56□□□□□ -1.2
RBM39-218ENST00000449489 NTN3O00634 580 aaPredicted RBP7.55□□□□□ -1.2
RBM39-218ENST00000449489 EIF3DO15371 548 aaKnown RBP eCLIP7.55□□□□□ -1.2
RBM39-218ENST00000449489 PHACTR2O75167 634 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 RPN1P04843 607 aaKnown RBP7.55□□□□□ -1.2
RBM39-218ENST00000449489 ZNF16P17020 682 aaPredicted RBP7.55□□□□□ -1.2
RBM39-218ENST00000449489 HOXD13P35453 343 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 CSKP41240 450 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 PDX1P52945 283 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 CLCA4Q14CN2 919 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms