RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 FAM171BQ6P995 826 aa17.23■□□□□ 0.35
TOM1-210ENST00000449058 AGMOQ6ZNB7 445 aa17.23■□□□□ 0.35
TOM1-210ENST00000449058 ADGRG6Q86SQ4 1221 aa17.23■□□□□ 0.35
TOM1-210ENST00000449058 ZC3HC1Q86WB0 502 aaKnown RBP17.23■□□□□ 0.35
TOM1-210ENST00000449058 PHTF2Q8N3S3 785 aa17.23■□□□□ 0.35
TOM1-210ENST00000449058 TMEM151AQ8N4L1 468 aa17.23■□□□□ 0.35
TOM1-210ENST00000449058 RDH11Q8TC12 318 aa17.23■□□□□ 0.35
TOM1-210ENST00000449058 DQX1Q8TE96 717 aaKnown RBP17.23■□□□□ 0.35
TOM1-210ENST00000449058 SREK1Q8WXA9 508 aaKnown RBP17.23■□□□□ 0.35
TOM1-210ENST00000449058 GATA5Q9BWX5 397 aaPredicted RBP17.23■□□□□ 0.35
TOM1-210ENST00000449058 MID2Q9UJV3 735 aa17.23■□□□□ 0.35
TOM1-210ENST00000449058 GIT1Q9Y2X7 761 aa17.23■□□□□ 0.35
TOM1-210ENST00000449058 PTPRDP23468 1912 aa17.23■□□□□ 0.35
TOM1-210ENST00000449058 DPPA5A6NC42 116 aa17.23■□□□□ 0.35
TOM1-210ENST00000449058 NCF2P19878 526 aaPredicted RBP17.23■□□□□ 0.35
TOM1-210ENST00000449058 SCNN1GP51170 649 aa17.23■□□□□ 0.35
TOM1-210ENST00000449058 METTL21CQ5VZV1 264 aa17.23■□□□□ 0.35
TOM1-210ENST00000449058 OTOP3Q7RTS5 596 aa17.23■□□□□ 0.35
TOM1-210ENST00000449058 RHOJQ9H4E5 214 aa17.23■□□□□ 0.35
TOM1-210ENST00000449058 NDE1Q9NXR1 346 aa17.23■□□□□ 0.35
TOM1-210ENST00000449058 PPM1HQ9ULR3 514 aa17.23■□□□□ 0.35
TOM1-210ENST00000449058 CASTOR2A6NHX0 329 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 ZBTB14O43829 449 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 CCNCP24863 283 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 CYP2C18P33260 490 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 SLC9B1Q4ZJI4 515 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 FSCBQ5H9T9 825 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 BEND5Q7L4P6 421 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 SLC25A41Q8N5S1 370 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 MAPK15Q8TD08 544 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 UCMAQ8WVF2 138 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 ACBD6Q9BR61 282 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 SLC39A10Q9ULF5 831 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 MYLKQ15746 1914 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 SBK3P0C264 359 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 PSEN1P49768 467 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 CFAP157Q5JU67 520 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 ZYG11AQ6WRX3 759 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 MRPL10Q7Z7H8 261 aaKnown RBP17.22■□□□□ 0.35
TOM1-210ENST00000449058 LCA5Q86VQ0 697 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 ARHGAP12Q8IWW6 846 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 TDRD5Q8NAT2 981 aaKnown RBP17.22■□□□□ 0.35
TOM1-210ENST00000449058 PKMYT1Q99640 499 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 APBA2Q99767 749 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 ACE2Q9BYF1 805 aaPredicted RBP17.22■□□□□ 0.35
TOM1-210ENST00000449058 ARHGEF38Q9NXL2 777 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 AAR2Q9Y312 384 aaKnown RBP17.22■□□□□ 0.35
TOM1-210ENST00000449058 NLRC5Q86WI3 1866 aa17.22■□□□□ 0.35
TOM1-210ENST00000449058 GOLGA8TH3BQL2 631 aa17.21■□□□□ 0.35
TOM1-210ENST00000449058 DCXO43602 365 aa17.21■□□□□ 0.35
TOM1-210ENST00000449058 ODC1P11926 461 aa17.21■□□□□ 0.35
TOM1-210ENST00000449058 ITGAXP20702 1163 aa17.21■□□□□ 0.35
TOM1-210ENST00000449058 GLDCP23378 1020 aa17.21■□□□□ 0.35
TOM1-210ENST00000449058 BDNFP23560 247 aa17.21■□□□□ 0.35
TOM1-210ENST00000449058 ITGA7Q13683 1181 aa17.21■□□□□ 0.35
TOM1-210ENST00000449058 RNF34Q969K3 372 aa17.21■□□□□ 0.35
TOM1-210ENST00000449058 SENP6Q9GZR1 1112 aaPredicted RBP17.21■□□□□ 0.35
TOM1-210ENST00000449058 S100A14Q9HCY8 104 aa17.21■□□□□ 0.35
TOM1-210ENST00000449058 CPSF2Q9P2I0 782 aaKnown RBP17.21■□□□□ 0.35
TOM1-210ENST00000449058 CDH22Q9UJ99 828 aa17.21■□□□□ 0.35
TOM1-210ENST00000449058 SCN10AQ9Y5Y9 1956 aa17.21■□□□□ 0.35
TOM1-210ENST00000449058 MYADML2A6NDP7 307 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 CYP11A1P05108 521 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 COX4I1P13073 169 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 DNAJB1P25685 340 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 GABRB3P28472 473 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 ERFP50548 548 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 TUBP50607 506 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 KLF10Q13118 480 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 PCID2Q5JVF3 399 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 PKN3Q6P5Z2 889 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 TMEM154Q6P9G4 183 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 ARHGAP36Q6ZRI8 547 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 FRMD7Q6ZUT3 714 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 CNTN4Q8IWV2 1026 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 SPATA22Q8NHS9 363 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 USP33Q8TEY7 942 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 ZNF419Q96HQ0 510 aaPredicted RBP17.21■□□□□ 0.34
TOM1-210ENST00000449058 FCRL5Q96RD9 977 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 TTC1Q99614 292 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 IL12RB2Q99665 862 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 DRC3Q9H069 523 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 ILKAPQ9H0C8 392 aaPredicted RBP17.21■□□□□ 0.34
TOM1-210ENST00000449058 DMAP1Q9NPF5 467 aaPredicted RBP17.21■□□□□ 0.34
TOM1-210ENST00000449058 MAN1C1Q9NR34 630 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 TMLHEQ9NVH6 421 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 TLK1Q9UKI8 766 aa17.21■□□□□ 0.34
TOM1-210ENST00000449058 MATN2O00339 956 aa17.2■□□□□ 0.34
TOM1-210ENST00000449058 CABYRO75952 493 aa17.2■□□□□ 0.34
TOM1-210ENST00000449058 CHRNA1P02708 482 aa17.2■□□□□ 0.34
TOM1-210ENST00000449058 SRGAP2BP0DMP2 458 aa17.2■□□□□ 0.34
TOM1-210ENST00000449058 HOXC13P31276 330 aa17.2■□□□□ 0.34
TOM1-210ENST00000449058 PRKAA2P54646 552 aa17.2■□□□□ 0.34
TOM1-210ENST00000449058 CCNIQ14094 377 aa17.2■□□□□ 0.34
TOM1-210ENST00000449058 ARTNQ5T4W7 220 aa17.2■□□□□ 0.34
TOM1-210ENST00000449058 LIPMQ5VYY2 423 aa17.2■□□□□ 0.34
TOM1-210ENST00000449058 DENND5AQ6IQ26 1287 aa17.2■□□□□ 0.34
TOM1-210ENST00000449058 RWDD4Q6NW29 188 aaKnown RBP17.2■□□□□ 0.34
TOM1-210ENST00000449058 APLFQ8IW19 511 aaPredicted RBP17.2■□□□□ 0.34
TOM1-210ENST00000449058 C2orf69Q8N8R5 385 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms