RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 NFKB1P19838 968 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 GNL1P36915 607 aaPredicted RBP13.91□□□□□ -0.18
POLR1B-209ENST00000448770 NAGLUP54802 743 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 FLOT2Q14254 428 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 NADK2Q4G0N4 442 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 KIAA0319Q5VV43 1072 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 ALKAL1Q6UXT8 129 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 RBM44Q6ZP01 1051 aaKnown RBP13.91□□□□□ -0.18
POLR1B-209ENST00000448770 SDCCAG8Q86SQ7 713 aaPredicted RBP13.91□□□□□ -0.18
POLR1B-209ENST00000448770 CENPLQ8N0S6 344 aaPredicted RBP13.91□□□□□ -0.18
POLR1B-209ENST00000448770 LRRC52Q8N7C0 313 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 DNAAF3Q8N9W5 541 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 BHLHE22Q8NFJ8 381 aaPredicted RBP13.91□□□□□ -0.18
POLR1B-209ENST00000448770 ZNF419Q96HQ0 510 aaPredicted RBP13.91□□□□□ -0.18
POLR1B-209ENST00000448770 SGIP1Q9BQI5 828 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 DRC3Q9H069 523 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 C20orf96Q9NUD7 363 aaPredicted RBP13.91□□□□□ -0.18
POLR1B-209ENST00000448770 SETD4Q9NVD3 440 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 CACNG4Q9UBN1 327 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 CENPFP49454 3210 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 SHROOM3Q8TF72 1996 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 TARM1B6A8C7 271 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 HDAC3O15379 428 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 SLC35E2BP0CK96 405 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 CYP2C8P10632 490 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 ENO3P13929 434 aaPredicted RBP13.9□□□□□ -0.18
POLR1B-209ENST00000448770 PTPN1P18031 435 aaKnown RBP13.9□□□□□ -0.18
POLR1B-209ENST00000448770 ADCYAP1R1P41586 468 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 PPP2R5DQ14738 602 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 PABPC1LQ4VXU2 614 aaKnown RBP13.9□□□□□ -0.18
POLR1B-209ENST00000448770 MAP3K21Q5TCX8 1036 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 METTL21CQ5VZV1 264 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 BNC2Q6ZN30 1099 aaPredicted RBP13.9□□□□□ -0.18
POLR1B-209ENST00000448770 PTAR1Q7Z6K3 402 aaPredicted RBP13.9□□□□□ -0.18
POLR1B-209ENST00000448770 KYQ8NBH2 561 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 EZH1Q92800 747 aaPredicted RBP13.9□□□□□ -0.18
POLR1B-209ENST00000448770 CNBD2Q96M20 576 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 NPAS2Q99743 824 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 TASP1Q9H6P5 420 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 WDR6Q9NNW5 1121 aaKnown RBP13.9□□□□□ -0.18
POLR1B-209ENST00000448770 TMEM30AQ9NV96 361 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 C6orf203Q9P0P8 240 aaPredicted RBP13.9□□□□□ -0.18
POLR1B-209ENST00000448770 HSFX1Q9UBD0 423 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 NUP205Q92621 2012 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 PRSS51A0A1B0GVH4 220 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 RGSL1A5PLK6 1076 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 PIRO00625 290 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 MPOP05164 745 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 TFEBP19484 476 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 SEMA3BQ13214 749 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 DYNC1I2Q13409 638 aaKnown RBP13.9□□□□□ -0.18
POLR1B-209ENST00000448770 PDCD2Q16342 344 aaPredicted RBP13.9□□□□□ -0.18
POLR1B-209ENST00000448770 KYAT1Q16773 422 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 FBXO47Q5MNV8 452 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 ZNF280DQ6N043 979 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 ZYG11AQ6WRX3 759 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 ARHGAP22Q7Z5H3 698 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 B4GALNT2Q8NHY0 566 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 HMGCLL1Q8TB92 370 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 ZSCAN18Q8TBC5 510 aaPredicted RBP13.9□□□□□ -0.18
POLR1B-209ENST00000448770 UPF1Q92900 1129 aaKnown RBP eCLIP13.9□□□□□ -0.18
POLR1B-209ENST00000448770 MPP4Q96JB8 637 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 HSFY1Q96LI6 401 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 GRIP2Q9C0E4 1043 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 ILKAPQ9H0C8 392 aaPredicted RBP13.9□□□□□ -0.18
POLR1B-209ENST00000448770 ADAMTS10Q9H324 1103 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 PRPF19Q9UMS4 504 aaKnown RBP13.9□□□□□ -0.18
POLR1B-209ENST00000448770 LZTS1Q9Y250 596 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 RAP2CQ9Y3L5 183 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 MYLKQ15746 1914 aa13.9□□□□□ -0.18
POLR1B-209ENST00000448770 TCAF2A6NFQ2 919 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 KPNA7A9QM74 516 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 ACOT8O14734 319 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 XPO1O14980 1071 aaKnown RBP13.89□□□□□ -0.19
POLR1B-209ENST00000448770 RNASEH2AO75792 299 aaKnown RBP13.89□□□□□ -0.19
POLR1B-209ENST00000448770 PGK1P00558 417 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 THRAP10827 490 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 ATP6V1B1P15313 513 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 TCN1P20061 433 aaPredicted RBP13.89□□□□□ -0.19
POLR1B-209ENST00000448770 RPL14P50914 215 aaKnown RBP13.89□□□□□ -0.19
POLR1B-209ENST00000448770 GRIK4Q16099 956 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 MYLK3Q32MK0 819 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 SEL1L3Q68CR1 1132 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 GPRIN1Q7Z2K8 1008 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 ZC3HC1Q86WB0 502 aaKnown RBP13.89□□□□□ -0.19
POLR1B-209ENST00000448770 EGFL6Q8IUX8 553 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 SLC41A1Q8IVJ1 513 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 CEP97Q8IW35 865 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 GALNT4Q8N4A0 578 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 SNX31Q8N9S9 440 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 BEST2Q8NFU1 509 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 FAM49AQ9H0Q0 323 aaPredicted RBP13.89□□□□□ -0.19
POLR1B-209ENST00000448770 EPB41L1Q9H4G0 881 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 TNFRSF12AQ9NP84 129 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 COPG1Q9Y678 874 aaKnown RBP13.89□□□□□ -0.19
POLR1B-209ENST00000448770 MRPL42Q9Y6G3 142 aaKnown RBP13.89□□□□□ -0.19
POLR1B-209ENST00000448770 DLX3O60479 287 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 SLC25A27O95847 323 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 HDCP19113 662 aa13.89□□□□□ -0.19
POLR1B-209ENST00000448770 PPARGP37231 505 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms