RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 IFI16Q16666 785 aaKnown RBP14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 TTC31Q49AM3 519 aaPredicted RBP14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 ATP13A4Q4VNC1 1196 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 C9orf64Q5T6V5 341 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 DSG4Q86SJ6 1040 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 DAAM2Q86T65 1068 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 CACUL1Q86Y37 369 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 RHOT1Q8IXI2 618 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 HMCESQ96FZ2 354 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 CELF6Q96J87 481 aaKnown RBP14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 DESI2Q9BSY9 194 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 KLHL11Q9NVR0 708 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 SMG5Q9UPR3 1016 aaKnown RBP14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 REXO2Q9Y3B8 237 aaKnown RBP14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 FRYLO94915 3013 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 LRRD1A4D1F6 860 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 RCCD1A6NED2 376 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 K7ERQ8 282 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 DFFAO00273 331 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 DCLK1O15075 740 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 ZMPSTE24O75844 475 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 RHOBTB1O94844 696 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 SERPINB6P35237 376 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 P2RY2P41231 377 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 ARF5P84085 180 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 LRRC38Q5VT99 294 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 C11orf63Q6NUN7 778 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 SLC36A4Q6YBV0 504 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 Q6ZVU0 165 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 METTL3Q86U44 580 aaKnown RBP14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 LRRC8AQ8IWT6 810 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 STK40Q8N2I9 435 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 GANCQ8TET4 914 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 FRS2Q8WU20 508 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 OR8D1Q8WZ84 308 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 PTPRN2Q92932 1015 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 ZNF670Q9BS34 389 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 CEP44Q9C0F1 390 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 SLC39A8Q9C0K1 460 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 RSPH9Q9H1X1 276 aaPredicted RBP14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 NOL6Q9H6R4 1146 aaKnown RBP14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 LRRC19Q9H756 370 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 DDX56Q9NY93 547 aaKnown RBP14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 SCML1Q9UN30 329 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 CYP8B1Q9UNU6 501 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 NCKAP1Q9Y2A7 1128 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 HYOU1Q9Y4L1 999 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 ALG6Q9Y672 507 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 DOCK4Q8N1I0 1966 aa14.31□□□□□ -0.12
GTF3C3-206ENST00000448539 WDR87Q6ZQQ6 2873 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 C1QTNF3-AMACRE9PGA6 284 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 PJA2O43164 708 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 NDUFS2O75306 463 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 IL1BP01584 269 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 KRT1P04264 644 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 PTMAP06454 111 aaKnown RBP14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 CD48P09326 243 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 VAV1P15498 845 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 OXTRP30559 389 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 PAPOLAP51003 745 aaKnown RBP14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 ARSEP51690 589 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 RPS14P62263 151 aaKnown RBP14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 DPYSL3Q14195 570 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 LPAL2Q16609 132 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 MAP7D1Q3KQU3 841 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 FAM46CQ5VWP2 391 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 C22orf39Q6P5X5 142 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 LEKR1Q6ZMV7 388 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 MMAAQ8IVH4 418 aaKnown RBP14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 PCDH20Q8N6Y1 951 aaKnown RBP14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 TPCN2Q8NHX9 752 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 FAM71BQ8TC56 605 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 CASKIN2Q8WXE0 1202 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 TSC1Q92574 1164 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 MAK16Q9BXY0 300 aaKnown RBP14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 TSGA10Q9BZW7 698 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 LACRTQ9GZZ8 138 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 ITM2CQ9NQX7 267 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 USP36Q9P275 1121 aaKnown RBP14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 UBA2Q9UBT2 640 aaPredicted RBP14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 GMEB2Q9UKD1 530 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 FCF1Q9Y324 198 aaKnown RBP14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 DUSP10Q9Y6W6 482 aa14.3□□□□□ -0.12
GTF3C3-206ENST00000448539 MCF2LO15068 1137 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 ALOX15BO15296 676 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 SMAD6O43541 496 aaKnown RBP14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 PSTPIP1O43586 416 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 ADH1BP00325 375 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 KDELR1P24390 212 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 CD6P30203 668 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 PSMD8P48556 350 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 TPMTP51580 245 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 RPL6Q02878 288 aaKnown RBP14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 MMRN1Q13201 1228 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 CST6Q15828 149 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 PLK5Q496M5 336 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 INO80DQ53TQ3 878 aaPredicted RBP14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 ANKRD20A8PQ5CZ79 823 aa14.29□□□□□ -0.12
GTF3C3-206ENST00000448539 LAIR1Q6GTX8 287 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms