RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ORAI3Q9BRQ5 295 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 LACRTQ9GZZ8 138 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 NEUROG2Q9H2A3 272 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 METTL5Q9NRN9 209 aaKnown RBP14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 CNOT8Q9UFF9 292 aaKnown RBP14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 FZD4Q9ULV1 537 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 ERVW-1Q9UQF0 538 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 GPSM3Q9Y4H4 160 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 SLCO1B1Q9Y6L6 691 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 TMEM131Q92545 1883 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 FASNP49327 2511 aaKnown RBP14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 EDDM13A0A1B0GTR0 161 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 FAM47DPA6NHR8 397 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 H0Y8X5 98 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 KCNK3O14649 394 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 MID1O15344 667 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 CALB1P05937 261 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 IGHV4-34P06331 123 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 CDK4P11802 303 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 SLC8A1P32418 973 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 CCR5P51681 352 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 OXCT1P55809 520 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 SULT2A1Q06520 285 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 FSCBQ5H9T9 825 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 PITRM1Q5JRX3 1037 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 FAM102AQ5T9C2 384 aaPredicted RBP14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 RNF219Q5W0B1 726 aaPredicted RBP14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 NCEH1Q6PIU2 408 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 KIAA1328Q86T90 577 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 MMAAQ8IVH4 418 aaKnown RBP14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 C17orf53Q8N3J3 647 aaPredicted RBP14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 EMC1Q8N766 993 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 MSANTD4Q8NCY6 345 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 JOSD2Q8TAC2 188 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 PRICKLE1Q96MT3 831 aaPredicted RBP14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 TRIM7Q9C029 511 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 MTG2Q9H4K7 406 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 POPDC2Q9HBU9 364 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 BTBD3Q9Y2F9 522 aa14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 MUC22E2RYF6 1773 aaPredicted RBP14.13□□□□□ -0.15
PDLIM2-213ENST00000448520 FREM2Q5SZK8 3169 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 A0A1B0GTQ1 180 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 A0A1W2PP55 124 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 ANKRD62A6NC57 917 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 E9PAM4 449 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 YKT6O15498 198 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 NRDCO43847 1150 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 ADH1BP00325 375 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 TMEM253P0C7T8 217 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 SLC2A3P11169 496 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 GOT1P17174 413 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 C5AR1P21730 350 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 VAV2P52735 878 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 RNASE9P60153 205 aaKnown RBP14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 YWHAZP63104 245 aaKnown RBP14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 SLC6A3Q01959 620 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 MTA1Q13330 715 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 SYPL2Q5VXT5 272 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 DNAJC24Q6P3W2 148 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 SND1Q7KZF4 910 aaKnown RBP eCLIP14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 LGI2Q8N0V4 545 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 CFAP52Q8N1V2 620 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 ATP6V0D2Q8N8Y2 350 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 MYEOVQ96EZ4 313 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 FAM129BQ96TA1 746 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 ELF4Q99607 663 aaPredicted RBP14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 SLCO3A1Q9UIG8 710 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 SALL4Q9UJQ4 1053 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 DUSP10Q9Y6W6 482 aa14.12□□□□□ -0.15
PDLIM2-213ENST00000448520 ARID1BQ8NFD5 2236 aaPredicted RBP14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 TRABD2BA6NFA1 517 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 GOLGA8CPA6NN73 597 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 USP27XA6NNY8 438 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 TTC34A8MYJ7 566 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 RNASEH2AO75792 299 aaKnown RBP14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 IPO7O95373 1038 aaKnown RBP14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 TRUB2O95900 331 aaKnown RBP14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 MOCS2O96007 188 aaPredicted RBP14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 CYP1A2P05177 515 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 C1SP09871 688 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 TACR2P21452 398 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 CD38P28907 300 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 FLT3P36888 993 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 ARHGAP25P42331 645 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 VASPP50552 380 aaPredicted RBP14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 PLK1P53350 603 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 RPL7AP62424 266 aaKnown RBP14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 PITX1P78337 314 aaPredicted RBP14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 OGDHQ02218 1023 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 MAMLD1Q13495 774 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 COL9A2Q14055 689 aaPredicted RBP14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 SMAD1Q15797 465 aaKnown RBP14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 SLC45A4Q5BKX6 768 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 ZC3H12AQ5D1E8 599 aaKnown RBP14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 KCNT1Q5JUK3 1230 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 TTC39BQ5VTQ0 682 aaPredicted RBP14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 PLEKHA7Q6IQ23 1121 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 TAC4Q86UU9 113 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 TMPRSS12Q86WS5 348 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms