RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 KLF15Q9UIH9 416 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 TMEM5Q9Y2B1 443 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 LMO7Q8WWI1 1683 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 CCDC194A0A1B0GVG4 234 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 ABCB7O75027 752 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 UGT2B11O75310 529 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 BCAS1O75363 584 aaPredicted RBP10.91□□□□□ -0.66
LINC00342-202ENST00000448494 SEMA3DO95025 777 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 C7P10643 843 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 RALBP11234 206 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 MTHFD1P11586 935 aaKnown RBP10.91□□□□□ -0.66
LINC00342-202ENST00000448494 MX2P20592 715 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 ME2P23368 584 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 BAMBIQ13145 260 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 HIST2H2ACQ16777 129 aaPredicted RBP10.91□□□□□ -0.66
LINC00342-202ENST00000448494 RBM20Q5T481 1227 aaKnown RBP10.91□□□□□ -0.66
LINC00342-202ENST00000448494 PDPK2PQ6A1A2 396 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 DESI1Q6ICB0 168 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 ARSKQ6UWY0 536 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 PRR23BQ6ZRT6 265 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 DYMQ7RTS9 669 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 SLCO6A1Q86UG4 719 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 IFNL3Q8IZI9 196 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 ZSWIM2Q8NEG5 633 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 IL17RDQ8NFM7 739 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 GTF2H4Q92759 462 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 TSEN34Q9BSV6 310 aaKnown RBP10.91□□□□□ -0.66
LINC00342-202ENST00000448494 ADAM33Q9BZ11 813 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 TMEM168Q9H0V1 697 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 PRDM8Q9NQV8 689 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 SH3GLB2Q9NR46 395 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.91□□□□□ -0.66
LINC00342-202ENST00000448494 FAM8A1Q9UBU6 413 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 ZC3H7BQ9UGR2 993 aaKnown RBP10.91□□□□□ -0.66
LINC00342-202ENST00000448494 TRPC5Q9UL62 973 aaPredicted RBP10.91□□□□□ -0.66
LINC00342-202ENST00000448494 TBX22Q9Y458 520 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 CSNK1G3Q9Y6M4 447 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 RREB1Q92766 1687 aa10.91□□□□□ -0.66
LINC00342-202ENST00000448494 DENND3A2RUS2 1198 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 H3BMM5 538 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 COPEO14579 308 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 VNN1O95497 513 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 GOT2P00505 430 aaKnown RBP10.9□□□□□ -0.66
LINC00342-202ENST00000448494 SERPINB2P05120 415 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 TRAPPC2P0DI81 140 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 TRAPPC2BP0DI82 140 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 SLC5A1P13866 664 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 HOXB3P14651 431 aaPredicted RBP10.9□□□□□ -0.66
LINC00342-202ENST00000448494 HNF1BP35680 557 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 EIF2DP41214 584 aaKnown RBP10.9□□□□□ -0.66
LINC00342-202ENST00000448494 SLC12A2P55011 1212 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 GPX6P59796 221 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 UBXN2AP68543 259 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 ALFQ53S48 1182 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 FAM26DQ5JW98 314 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 FAM26FQ5R3K3 315 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 RINT1Q6NUQ1 792 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 LMBR1LQ6UX01 489 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 ZBTB49Q6ZSB9 765 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 GATAD2AQ86YP4 633 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 CDH26Q8IXH8 852 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 UBR7Q8N806 425 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 POC5Q8NA72 575 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 TMEM35BQ8NCS4 154 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 NKD2Q969F2 451 aaPredicted RBP10.9□□□□□ -0.66
LINC00342-202ENST00000448494 DUS3LQ96G46 650 aaKnown RBP10.9□□□□□ -0.66
LINC00342-202ENST00000448494 RNF170Q96K19 258 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 TNIP3Q96KP6 325 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 GPR88Q9GZN0 384 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 KCTD5Q9NXV2 234 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 TAS2R14Q9NYV8 317 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 GLTPQ9NZD2 209 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 KIF17Q9P2E2 1029 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 SERPINA10Q9UK55 444 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 MAPRE3Q9UPY8 281 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 KLF2Q9Y5W3 355 aaPredicted RBP10.9□□□□□ -0.66
LINC00342-202ENST00000448494 KCNE2Q9Y6J6 123 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 STON1Q9Y6Q2 735 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 LRP5O75197 1615 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 CROCCQ5TZA2 2017 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 ACOT8O14734 319 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 DDAH1O94760 285 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 XRCC5P13010 732 aaKnown RBP10.9□□□□□ -0.66
LINC00342-202ENST00000448494 CDH5P33151 784 aaPredicted RBP10.9□□□□□ -0.66
LINC00342-202ENST00000448494 UGT2B10P36537 528 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 HTR3AP46098 478 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 MAPK10P53779 464 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 CYP4F2P78329 520 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 CYP4F3Q08477 520 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 LAMC2Q13753 1193 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 MFSD13AQ14CX5 517 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 DGUOKQ16854 277 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 GARNL3Q5VVW2 1013 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 LDHAL6AQ6ZMR3 332 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 BBS12Q6ZW61 710 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 PIWIL3Q7Z3Z3 882 aaKnown RBP10.9□□□□□ -0.66
LINC00342-202ENST00000448494 TBC1D21Q8IYX1 336 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 KIAA1958Q8N8K9 716 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 RHOXF1Q8NHV9 184 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 PIWIL2Q8TC59 973 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms