RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 CKMT2P17540 419 aa16.09■□□□□ 0.17
CHRD-205ENST00000448472 GPR20Q99678 358 aa16.09■□□□□ 0.17
CHRD-205ENST00000448472 NEMP2A6NFY4 417 aa16.09■□□□□ 0.17
CHRD-205ENST00000448472 ARSAP15289 507 aa16.09■□□□□ 0.17
CHRD-205ENST00000448472 ICAM3P32942 547 aa16.09■□□□□ 0.17
CHRD-205ENST00000448472 TPI1P60174 286 aa16.09■□□□□ 0.17
CHRD-205ENST00000448472 PSME3P61289 254 aa16.09■□□□□ 0.17
CHRD-205ENST00000448472 ACBD5Q5T8D3 534 aaPredicted RBP16.09■□□□□ 0.17
CHRD-205ENST00000448472 METTL21CQ5VZV1 264 aa16.09■□□□□ 0.17
CHRD-205ENST00000448472 IFNEQ86WN2 208 aa16.09■□□□□ 0.17
CHRD-205ENST00000448472 EXOC8Q8IYI6 725 aa16.09■□□□□ 0.17
CHRD-205ENST00000448472 CHST13Q8NET6 341 aa16.09■□□□□ 0.17
CHRD-205ENST00000448472 GRIN3AQ8TCU5 1115 aa16.09■□□□□ 0.17
CHRD-205ENST00000448472 KLHL32Q96NJ5 620 aa16.09■□□□□ 0.17
CHRD-205ENST00000448472 PDGFDQ9GZP0 370 aaPredicted RBP16.09■□□□□ 0.17
CHRD-205ENST00000448472 ATXN3LQ9H3M9 355 aa16.09■□□□□ 0.17
CHRD-205ENST00000448472 SMARCAD1Q9H4L7 1026 aa16.09■□□□□ 0.17
CHRD-205ENST00000448472 MPOP05164 745 aa16.08■□□□□ 0.17
CHRD-205ENST00000448472 GNL1P36915 607 aaPredicted RBP16.08■□□□□ 0.17
CHRD-205ENST00000448472 KIZQ2M2Z5 673 aa16.08■□□□□ 0.17
CHRD-205ENST00000448472 STXBP5Q5T5C0 1151 aa16.08■□□□□ 0.17
CHRD-205ENST00000448472 SETD3Q86TU7 594 aaPredicted RBP16.08■□□□□ 0.17
CHRD-205ENST00000448472 RYBPQ8N488 228 aaPredicted RBP16.08■□□□□ 0.17
CHRD-205ENST00000448472 PHF21BQ96EK2 531 aa16.08■□□□□ 0.17
CHRD-205ENST00000448472 ELMO2Q96JJ3 720 aa16.08■□□□□ 0.17
CHRD-205ENST00000448472 EFHD1Q9BUP0 239 aa16.08■□□□□ 0.17
CHRD-205ENST00000448472 PTPRHQ9HD43 1115 aa16.08■□□□□ 0.17
CHRD-205ENST00000448472 ZNF839A8K0R7 811 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 G3V2L1 256 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 ZBTB24O43167 697 aaPredicted RBP16.08■□□□□ 0.16
CHRD-205ENST00000448472 HBP1O60381 514 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 DDHD2O94830 711 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 MCF2P10911 925 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 MAGEA6P43360 314 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 LIPMQ5VYY2 423 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 RWDD4Q6NW29 188 aaKnown RBP16.08■□□□□ 0.16
CHRD-205ENST00000448472 PGAM4Q8N0Y7 254 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 RMND5BQ96G75 393 aaPredicted RBP16.08■□□□□ 0.16
CHRD-205ENST00000448472 ZNF512Q96ME7 567 aaPredicted RBP16.08■□□□□ 0.16
CHRD-205ENST00000448472 PDZD7Q9H5P4 517 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 TUBGCP4Q9UGJ1 667 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 RSL24D1Q9UHA3 163 aaKnown RBP16.08■□□□□ 0.16
CHRD-205ENST00000448472 MATN2O00339 956 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 GIPC1O14908 333 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 DENRO43583 198 aaKnown RBP16.08■□□□□ 0.16
CHRD-205ENST00000448472 GAS2O43903 313 aaKnown RBP16.08■□□□□ 0.16
CHRD-205ENST00000448472 TIPRLO75663 272 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 ALDH1A2O94788 518 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 PRKCGP05129 697 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 LMO2P25791 158 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 NUMBP49757 651 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 ZNF423Q2M1K9 1284 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 KIF19Q2TAC6 998 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 TREML2Q5T2D2 321 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 DLK2Q6UY11 383 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 PDZD4Q76G19 769 aaPredicted RBP16.08■□□□□ 0.16
CHRD-205ENST00000448472 PSTKQ8IV42 348 aaKnown RBP16.08■□□□□ 0.16
CHRD-205ENST00000448472 AHI1Q8N157 1196 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 IPMKQ8NFU5 416 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 SIK2Q9H0K1 926 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 CXCL16Q9H2A7 254 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 PDGFCQ9NRA1 345 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 ACOT9Q9Y305 439 aa16.08■□□□□ 0.16
CHRD-205ENST00000448472 AKAP5P24588 427 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 NMBRP28336 390 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 HSPA13P48723 471 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 KCTD21Q4G0X4 260 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 FSTL5Q8N475 847 aaPredicted RBP16.07■□□□□ 0.16
CHRD-205ENST00000448472 FAM47BQ8NA70 645 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 SLC35F5Q8WV83 523 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 KHSRPQ92945 711 aaKnown RBP eCLIP16.07■□□□□ 0.16
CHRD-205ENST00000448472 SLC39A3Q9BRY0 314 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 MTMR10Q9NXD2 777 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 PGAP2Q9UHJ9 254 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 V9GYQ6 96 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 ANKRD12Q6UB98 2062 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 IGKV6D-21A0A0A0MT36 114 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 CLDN5O00501 218 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 CDK4P11802 303 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 NFKB1P19838 968 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 BAG6P46379 1132 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 BST2Q10589 180 aaKnown RBP16.07■□□□□ 0.16
CHRD-205ENST00000448472 CSHL1Q14406 222 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 KCTD2Q14681 263 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 STEAP4Q687X5 459 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 CATSPER4Q7RTX7 472 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 TMEM110Q86TL2 294 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 LPGAT1Q92604 370 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 UPF3AQ9H1J1 476 aaKnown RBP16.07■□□□□ 0.16
CHRD-205ENST00000448472 TMEM165Q9HC07 324 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 MYRFQ9Y2G1 1151 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 COPG1Q9Y678 874 aaKnown RBP16.07■□□□□ 0.16
CHRD-205ENST00000448472 TRIP11Q15643 1979 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 TMEM114B3SHH9 223 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 ZNF286BP0CG31 522 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 ERCC2P18074 760 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 PRDX6P30041 224 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 SLC5A2P31639 672 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 ANO4Q32M45 955 aa16.07■□□□□ 0.16
CHRD-205ENST00000448472 PABPC1LQ4VXU2 614 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms