RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 ZNF460Q14592 562 aa20.82■□□□□ 0.92
SMARCD2-203ENST00000448276 KIZQ2M2Z5 673 aa20.82■□□□□ 0.92
SMARCD2-203ENST00000448276 SOWAHAQ2M3V2 549 aa20.82■□□□□ 0.92
SMARCD2-203ENST00000448276 ALDH16A1Q8IZ83 802 aa20.82■□□□□ 0.92
SMARCD2-203ENST00000448276 ZNF567Q8N184 647 aa20.82■□□□□ 0.92
SMARCD2-203ENST00000448276 CCNYL1Q8N7R7 359 aa20.82■□□□□ 0.92
SMARCD2-203ENST00000448276 FAM47BQ8NA70 645 aa20.82■□□□□ 0.92
SMARCD2-203ENST00000448276 GIPC3Q8TF64 312 aa20.82■□□□□ 0.92
SMARCD2-203ENST00000448276 DLG3Q92796 817 aa20.82■□□□□ 0.92
SMARCD2-203ENST00000448276 SFMBT1Q9UHJ3 866 aa20.82■□□□□ 0.92
SMARCD2-203ENST00000448276 BCAP29Q9UHQ4 241 aa20.82■□□□□ 0.92
SMARCD2-203ENST00000448276 DOLKQ9UPQ8 538 aa20.82■□□□□ 0.92
SMARCD2-203ENST00000448276 IGKV6D-21A0A0A0MT36 114 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 FARP2O94887 1054 aaPredicted RBP20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 ADRM1Q16186 407 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 HMBOX1Q6NT76 420 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 HERC6Q8IVU3 1022 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 LSMEM2Q8N112 164 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 FIBCD1Q8N539 461 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 CPB2Q96IY4 423 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 RNF19AQ9NV58 838 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 FAIMQ9NVQ4 179 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 SH3GLB1Q9Y371 365 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 PCDHGA7Q9Y5G6 932 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 SEC24DO94855 1032 aaPredicted RBP20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 LCP1P13796 627 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 CLCN3P51790 818 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 PSME3P61289 254 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 NSUN2Q08J23 767 aaKnown RBP eCLIP20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 PDAP1Q13442 181 aaKnown RBP20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 PITRM1Q5JRX3 1037 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 CERCAMQ5T4B2 595 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 PID1Q7Z2X4 250 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 NIM1KQ8IY84 436 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 CPSF7Q8N684 471 aaKnown RBP20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 LPGAT1Q92604 370 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 DRC3Q9H069 523 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 IARS2Q9NSE4 1012 aaKnown RBP20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 COL4A5P29400 1685 aa20.81■□□□□ 0.92
SMARCD2-203ENST00000448276 TRIM38O00635 465 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 TIPRLO75663 272 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 NR2C2P49116 596 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 SLC5A3P53794 718 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 LY6KQ17RY6 165 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 GLRA4Q5JXX5 417 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 IER5Q5VY09 327 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 PATL1Q86TB9 770 aaKnown RBP20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 TMEM151AQ8N4L1 468 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 C7orf31Q8N865 590 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 ZBTB8BQ8NAP8 495 aaPredicted RBP20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 KCTD4Q8WVF5 259 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 PPWD1Q96BP3 646 aaKnown RBP20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 OSBPL6Q9BZF3 934 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 CXCL9Q07325 125 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 Q6ZNX1 250 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 DNAAF3Q8N9W5 541 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 SGF29Q96ES7 293 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 MAML3Q96JK9 1138 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 MRPL45Q9BRJ2 306 aaKnown RBP20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 NT5C1AQ9BXI3 368 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 CXCL16Q9H2A7 254 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 ACAD9Q9H845 621 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 NME7Q9Y5B8 376 aa20.8■□□□□ 0.92
SMARCD2-203ENST00000448276 SH3PXD2BA1X283 911 aa20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 ACKR2O00590 384 aa20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 SOCS2O14508 198 aa20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 HTRA2O43464 458 aaPredicted RBP20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 SFSWAPQ12872 951 aaKnown RBP20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 GRM3Q14832 879 aa20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 AMHR2Q16671 573 aa20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 DGKDQ16760 1214 aa20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 SLC44A4Q53GD3 710 aa20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 LZTR1Q8N653 840 aa20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 SREK1Q8WXA9 508 aaKnown RBP20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 C12orf43Q96C57 262 aaKnown RBP20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 ISOC1Q96CN7 298 aa20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 ZCWPW2A0A1B0GU75 182 aa20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 STAMBPO95630 424 aa20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 IFRD2Q12894 506 aaPredicted RBP20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 RPS27LQ71UM5 84 aaKnown RBP20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 FASTKD5Q7L8L6 764 aaKnown RBP20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 SLC39A3Q9BRY0 314 aa20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 OSBPL11Q9BXB4 747 aa20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 PRDM12Q9H4Q4 367 aa20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 PLGRKTQ9HBL7 147 aa20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 CHRAC1Q9NRG0 131 aa20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 RUVBL2Q9Y230 463 aaKnown RBP20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 COL11A1P12107 1806 aaPredicted RBP20.79■□□□□ 0.92
SMARCD2-203ENST00000448276 ZBTB42B2RXF5 422 aa20.78■□□□□ 0.92
SMARCD2-203ENST00000448276 NRP1O14786 923 aa20.78■□□□□ 0.92
SMARCD2-203ENST00000448276 ZFXP17010 805 aaPredicted RBP20.78■□□□□ 0.92
SMARCD2-203ENST00000448276 PITX1P78337 314 aaPredicted RBP20.78■□□□□ 0.92
SMARCD2-203ENST00000448276 NAB1Q13506 487 aa20.78■□□□□ 0.92
SMARCD2-203ENST00000448276 TRIM25Q14258 630 aaKnown RBP20.78■□□□□ 0.92
SMARCD2-203ENST00000448276 SPANXN3Q5MJ09 141 aa20.78■□□□□ 0.92
SMARCD2-203ENST00000448276 LIPMQ5VYY2 423 aa20.78■□□□□ 0.92
SMARCD2-203ENST00000448276 ZNF786Q8N393 782 aa20.78■□□□□ 0.92
SMARCD2-203ENST00000448276 RNF169Q8NCN4 708 aa20.78■□□□□ 0.92
SMARCD2-203ENST00000448276 VPS39Q96JC1 886 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms