RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 C1orf167Q5SNV9 1468 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 CEP170BQ9Y4F5 1589 aaPredicted RBP7.89□□□□□ -1.15
NEDD9-204ENST00000448183 CPS1P31327 1500 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 BAZ2BQ9UIF8 2168 aaKnown RBP7.89□□□□□ -1.15
NEDD9-204ENST00000448183 DDTLA6NHG4 134 aaPredicted RBP7.89□□□□□ -1.15
NEDD9-204ENST00000448183 ADCY6O43306 1168 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 DYRK3O43781 588 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 BMP6P22004 513 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 HNRNPH3P31942 346 aaKnown RBP7.89□□□□□ -1.15
NEDD9-204ENST00000448183 CSNK2BP67870 215 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 AMPD2Q01433 879 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 MAMLD1Q13495 774 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 OVOS1Q6IE37 1185 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 MZT2BQ6NZ67 158 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 MTSS1LQ765P7 747 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 BPIFB6Q8NFQ5 453 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 DNERQ8NFT8 737 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 STAG3L4Q8TBR4 150 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 PROX1Q92786 737 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 PLEKHG4BQ96PX9 1271 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 MTMR9Q96QG7 549 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 PANX3Q96QZ0 392 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 OSMRQ99650 979 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 ATP13A1Q9HD20 1204 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 KCNQ5Q9NR82 932 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 TMEM216Q9P0N5 145 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 ZMYM5Q9UJ78 669 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 LEF1Q9UJU2 399 aaPredicted RBP7.89□□□□□ -1.15
NEDD9-204ENST00000448183 TTLL13PA6NNM8 815 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 H3BRB1 525 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 H7C0S8 307 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 EML1O00423 815 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 ABLIM1O14639 778 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 EPHB6O15197 1021 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 EDF1O60869 148 aaKnown RBP7.89□□□□□ -1.15
NEDD9-204ENST00000448183 WFS1O76024 890 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 KCNH1O95259 989 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 ACAT1P24752 427 aaKnown RBP7.89□□□□□ -1.15
NEDD9-204ENST00000448183 YWHAQP27348 245 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 MMP13P45452 471 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 XIAPP98170 497 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 DDR1Q08345 913 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 PCID2Q5JVF3 399 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 TMEM63BQ5T3F8 832 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 FAM180AQ6UWF9 173 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 UNC5AQ6ZN44 842 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 RBM44Q6ZP01 1051 aaKnown RBP7.89□□□□□ -1.15
NEDD9-204ENST00000448183 KRT74Q7RTS7 529 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 HERC6Q8IVU3 1022 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 IQCKQ8N0W5 287 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 LNX1Q8TBB1 728 aaPredicted RBP7.89□□□□□ -1.15
NEDD9-204ENST00000448183 CDK5RAP1Q96SZ6 601 aaKnown RBP7.89□□□□□ -1.15
NEDD9-204ENST00000448183 OSBPL11Q9BXB4 747 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 PHACTR1Q9C0D0 580 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 TUT1Q9H6E5 874 aaKnown RBP7.89□□□□□ -1.15
NEDD9-204ENST00000448183 SAE1Q9UBE0 346 aaPredicted RBP7.89□□□□□ -1.15
NEDD9-204ENST00000448183 POLLQ9UGP5 575 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 RSL24D1Q9UHA3 163 aaKnown RBP7.89□□□□□ -1.15
NEDD9-204ENST00000448183 SPATA31A6Q5VVP1 1343 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 IFRD1O00458 451 aaPredicted RBP7.89□□□□□ -1.15
NEDD9-204ENST00000448183 BIRC5O15392 142 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 CBFA2T3O75081 653 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 ZMPSTE24O75844 475 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 ITGAVP06756 1048 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 INSRRP14616 1297 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 ABCG1P45844 678 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 IL2P60568 153 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 USP46P62068 366 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 ZSWIM7Q19AV6 140 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 PERM1Q5SV97 790 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 INTS11Q5TA45 600 aaKnown RBP7.89□□□□□ -1.15
NEDD9-204ENST00000448183 GLT6D1Q7Z4J2 308 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 SYT12Q8IV01 421 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 ULK2Q8IYT8 1036 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 POC5Q8NA72 575 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 SLC2A14Q8TDB8 520 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 CAPSLQ8WWF8 208 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 REPS1Q96D71 796 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 MED8Q96G25 268 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 SMARCD1Q96GM5 515 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 FHDC1Q9C0D6 1143 aaPredicted RBP7.89□□□□□ -1.15
NEDD9-204ENST00000448183 PRPF19Q9UMS4 504 aaKnown RBP7.89□□□□□ -1.15
NEDD9-204ENST00000448183 RAP2CQ9Y3L5 183 aa7.89□□□□□ -1.15
NEDD9-204ENST00000448183 PREX1Q8TCU6 1659 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 RBAK-RBAKDNI3L0D1 243 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 FSCN2O14926 492 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 HOXA2O43364 376 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 KLRC4O43908 158 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 WARSP23381 471 aaKnown RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 ELAVL2Q12926 359 aaKnown RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 BNIP2Q12982 314 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 BOP1Q14137 746 aaKnown RBP7.88□□□□□ -1.15
NEDD9-204ENST00000448183 SPESP1Q6UW49 350 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 BBS12Q6ZW61 710 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 KRT77Q7Z794 578 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 RNF180Q86T96 592 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 FAM71AQ8IYT1 594 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 STK40Q8N2I9 435 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 KBTBD8Q8NFY9 601 aa7.88□□□□□ -1.15
NEDD9-204ENST00000448183 OR52K1Q8NGK4 314 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms