RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ITIH5Q86UX2 942 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 TBC1D10CQ8IV04 446 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 SLC25A45Q8N413 288 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 TMEM145Q8NBT3 493 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 RNF149Q8NC42 400 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 SEC14L1Q92503 715 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 DIO2Q92813 273 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 HVCN1Q96D96 273 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 SEPT5Q99719 369 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-205ENST00000447267 SSBP3Q9BWW4 388 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-205ENST00000447267 TRIM8Q9BZR9 551 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 PSTPIP2Q9H939 334 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 ADAM21Q9UKJ8 722 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 PCDHGA7Q9Y5G6 932 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 TMEM131Q92545 1883 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 NOTCH1P46531 2555 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 NEDD4P46934 1319 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 CROCCQ5TZA2 2017 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 MTMR11A4FU01 709 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 INO80B-WBP1J3KQ70 363 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 K7ESM1 405 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 SYN3O14994 580 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 FFAR2O15552 330 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 DUX1O43812 170 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 ZG16O60844 167 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 FGAP02671 866 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 PRKAR1AP10644 381 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 ATF6P18850 670 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 CD27P26842 260 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 AXLP30530 894 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 UGT1A5P35504 534 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 RNASE9P60153 205 aaKnown RBP5.3□□□□□ -1.56
SDCBP-205ENST00000447267 SSRP1Q08945 709 aaKnown RBP5.3□□□□□ -1.56
SDCBP-205ENST00000447267 ZRSR2Q15696 482 aaKnown RBP5.3□□□□□ -1.56
SDCBP-205ENST00000447267 DEFB109BQ30KR1 87 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 SV2CQ496J9 727 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 NADK2Q4G0N4 442 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 ATF7IP2Q5U623 682 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 E4F1Q66K89 784 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-205ENST00000447267 MFSD6Q6ZSS7 791 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 PLA2G4DQ86XP0 818 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 TMPRSS6Q8IU80 811 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 FBXO39Q8N4B4 442 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 KYQ8NBH2 561 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 C19orf60Q96EN9 201 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 SIPA1Q96FS4 1042 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 GABRG3Q99928 467 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 EBF2Q9HAK2 575 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 DLL4Q9NR61 685 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 FOXJ2Q9P0K8 574 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 LUZP4Q9P127 313 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 TCEAL9Q9UHQ7 104 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 MAGED2Q9UNF1 606 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-205ENST00000447267 GDAQ9Y2T3 454 aa5.3□□□□□ -1.56
SDCBP-205ENST00000447267 PRRC2AP48634 2157 aaKnown RBP5.3□□□□□ -1.56
SDCBP-205ENST00000447267 CCDC187A0A096LP49 1063 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 LY6G6EA0A0G2JKS1 128 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 PRAMEF33A0A0G2JMD5 474 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 PLD2O14939 933 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 KRT86O43790 486 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 PRAMEF10O60809 474 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 TULP3O75386 442 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 LARGE1O95461 756 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 CKMP06732 381 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 NAT2P11245 290 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 CKMT1AP12532 417 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 COX6B1P14854 86 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 HMGA1P17096 107 aaKnown RBP5.29□□□□□ -1.56
SDCBP-205ENST00000447267 BPIP17213 487 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 PCSK6P29122 969 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 HOXC12P31275 282 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 PTGER4P35408 488 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 ARRB1P49407 418 aaPredicted RBP5.29□□□□□ -1.56
SDCBP-205ENST00000447267 NPEPPSP55786 919 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 PPP2R2AP63151 447 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 SLFN5Q08AF3 891 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 NCBP1Q09161 790 aaKnown RBP5.29□□□□□ -1.56
SDCBP-205ENST00000447267 GPR17Q13304 367 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 SLC10A6Q3KNW5 377 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 SLC35F1Q5T1Q4 408 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 MROH9Q5TGP6 573 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 SDHAF4Q5VUM1 108 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 PLA2G4FQ68DD2 849 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 SLC27A1Q6PCB7 646 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 NOSTRINQ8IVI9 506 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 PPIL6Q8IXY8 311 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 TMEM57Q8N5G2 664 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 CELF2-AS1Q8N7Q2 184 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 IFI44Q8TCB0 444 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 MRPS31Q92665 395 aaKnown RBP5.29□□□□□ -1.56
SDCBP-205ENST00000447267 ARSGQ96EG1 525 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 KIF1BPQ96EK5 621 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 CCDC51Q96ER9 411 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 PPP1R10Q96QC0 940 aaKnown RBP5.29□□□□□ -1.56
SDCBP-205ENST00000447267 PREBQ9HCU5 417 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 GDF3Q9NR23 364 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 AASDHPPTQ9NRN7 309 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 UCKL1Q9NWZ5 548 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 PPARGC1AQ9UBK2 798 aaKnown RBP5.29□□□□□ -1.56
SDCBP-205ENST00000447267 PISDQ9UG56 409 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms