RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 CDKN3Q16667 212 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 TTC31Q49AM3 519 aaPredicted RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 TMEM215Q68D42 235 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 SERPINA13PQ6UXR4 307 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 TPGS1Q6ZTW0 290 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 EFL1Q7Z2Z2 1120 aaKnown RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 TMPRSS9Q7Z410 1059 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 CCDC148Q8NFR7 591 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 OR2T34Q8NGX1 318 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 APOBEC4Q8WW27 367 aaKnown RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 PIWIL1Q96J94 861 aaKnown RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 CCDC43Q96MW1 224 aaKnown RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 PYM1Q9BRP8 204 aaKnown RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 LRRC2Q9BYS8 371 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 B3GNT4Q9C0J1 378 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 CAAP1Q9H8G2 361 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 KLHL11Q9NVR0 708 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 ELOVL2Q9NXB9 296 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 ARHGAP20Q9P2F6 1191 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 ARHGAP28Q9P2N2 729 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 GTF3C4Q9UKN8 822 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 DIDO1Q9BTC0 2240 aaKnown RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 POLEQ07864 2286 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 FAM47DPA6NHR8 397 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 LRRC72A6NJI9 287 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 ZNF891A8MT65 544 aaPredicted RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 LACTBL1A8MY62 500 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 ZBTB43O43298 467 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 PRPF3O43395 683 aaKnown RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 FAM189A1O60320 539 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 TOM1L1O75674 476 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 PENKP01210 267 aaPredicted RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 HARSP12081 509 aaKnown RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 LIFP15018 202 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 CD1EP15812 388 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 CCKBRP32239 447 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 LEPRP48357 1165 aaKnown RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 RCAN1P53805 252 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 MCL1Q07820 350 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 TAF10Q12962 218 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 NPY5RQ15761 445 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 SNX30Q5VWJ9 437 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 ZCCHC8Q6NZY4 707 aaKnown RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 FAM171BQ6P995 826 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 CRTC1Q6UUV9 634 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 VSTM1Q6UX27 236 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 SYNE3Q6ZMZ3 975 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 DSG4Q86SJ6 1040 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 SCN4BQ8IWT1 228 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 KCT2Q8NC54 265 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 SORCS1Q8WY21 1168 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 NKD1Q969G9 470 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 TCHPQ9BT92 498 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 HAPLN2Q9GZV7 340 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 PABPC3Q9H361 631 aaKnown RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 PRSS16Q9NQE7 514 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 EHD2Q9NZN4 543 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 NCKIPSDQ9NZQ3 722 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 PISDQ9UG56 409 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 SCML1Q9UN30 329 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 FAM221AA4D161 298 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 TMX2-CTNND1H3BSU7 103 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 CNTN5O94779 1100 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 SLITRK5O94991 958 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 CLTAP09496 248 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 CD99P14209 185 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 GCFC2P16383 781 aaKnown RBP3.41□□□□□ -1.86
PMS1-215ENST00000447232 ITIH1P19827 911 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 ACAT1P24752 427 aaKnown RBP3.41□□□□□ -1.86
PMS1-215ENST00000447232 ITGA3P26006 1051 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 ETV5P41161 510 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 TAF6P49848 677 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 TUBP50607 506 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 PPP2CBP62714 309 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 PPP2CAP67775 309 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 CDC20Q12834 499 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 SPIDRQ14159 915 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 SLBPQ14493 270 aaKnown RBP eCLIP3.41□□□□□ -1.86
PMS1-215ENST00000447232 BMT2Q1RMZ1 405 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 C20orf194Q5TEA3 1177 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 ANKRD45Q5TZF3 282 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 FYB2Q5VWT5 728 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 NUGGCQ68CJ6 796 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 ZNF776Q68DI1 518 aaPredicted RBP3.41□□□□□ -1.86
PMS1-215ENST00000447232 LRFN4Q6PJG9 635 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 ASB18Q6ZVZ8 466 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 ANKS1BQ7Z6G8 1248 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 SPATA2LQ8IUW3 424 aaPredicted RBP3.41□□□□□ -1.86
PMS1-215ENST00000447232 CCDC13Q8IYE1 715 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 ZNF507Q8TCN5 953 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 GOLGA1Q92805 767 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 ELMO3Q96BJ8 720 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 SLC45A3Q96JT2 553 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 IFT74Q96LB3 600 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 CDH19Q9H159 772 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 RSPH9Q9H1X1 276 aaPredicted RBP3.41□□□□□ -1.86
PMS1-215ENST00000447232 C12orf49Q9H741 205 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 EPB41L5Q9HCM4 733 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 PLK2Q9NYY3 685 aa3.41□□□□□ -1.86
PMS1-215ENST00000447232 VPS54Q9P1Q0 977 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms