RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 HCAR3P49019 387 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 MRPS22P82650 360 aaKnown RBP19.42■□□□□ 0.7
SDCBP-204ENST00000447182 MAP7Q14244 749 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 INTS6LQ5JSJ4 861 aaKnown RBP19.42■□□□□ 0.7
SDCBP-204ENST00000447182 CERCAMQ5T4B2 595 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 KCTD13Q8WZ19 329 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 ZFRQ96KR1 1074 aaKnown RBP19.42■□□□□ 0.7
SDCBP-204ENST00000447182 ZNF560Q96MR9 790 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 MLPHQ9BV36 600 aaPredicted RBP19.42■□□□□ 0.7
SDCBP-204ENST00000447182 TASP1Q9H6P5 420 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 PIGVQ9NUD9 493 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 PTTG2Q9NZH5 202 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 TLK1Q9UKI8 766 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 PACSIN3Q9UKS6 424 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 TRHDEQ9UKU6 1024 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 SBF1O95248 1867 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 NEMP1O14524 444 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 OR6B1O95007 311 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 PGM3O95394 542 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 CLPTM1O96005 669 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 F7P08709 466 aaPredicted RBP19.41■□□□□ 0.7
SDCBP-204ENST00000447182 ADRA1BP35368 520 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 PNPLA4P41247 253 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 ABCG1P45844 678 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 HSPA13P48723 471 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 CREB5Q02930 508 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 SCAPQ12770 1279 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 CEACAM7Q14002 265 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 ZNF618Q5T7W0 954 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 APPL2Q8NEU8 664 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 STYXQ8WUJ0 223 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 RCN3Q96D15 328 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 MRPS26Q9BYN8 205 aaKnown RBP19.41■□□□□ 0.7
SDCBP-204ENST00000447182 ZBTB26Q9HCK0 441 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 IARS2Q9NSE4 1012 aaKnown RBP19.41■□□□□ 0.7
SDCBP-204ENST00000447182 CDYLQ9Y232 598 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 AP4B1Q9Y6B7 739 aa19.41■□□□□ 0.7
SDCBP-204ENST00000447182 SYNJ2BP-COX16A0A087WUM0 186 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 PRSS51A0A1B0GVH4 220 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 FAM72CH0Y354 149 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 H3BRB1 525 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 CXCL11O14625 94 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 BCAS2O75934 225 aaPredicted RBP19.4■□□□□ 0.7
SDCBP-204ENST00000447182 DDHD2O94830 711 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 TNFAIP8O95379 198 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 COL6A2P12110 1019 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 ME2P23368 584 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 GRM3Q14832 879 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 GRIK4Q16099 956 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 USP41Q3LFD5 358 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 FAM72AQ5TYM5 149 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 SYPL2Q5VXT5 272 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 ITPRIPL1Q6GPH6 555 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 FAM72DQ6L9T8 149 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 ZC3HC1Q86WB0 502 aaKnown RBP19.4■□□□□ 0.7
SDCBP-204ENST00000447182 FAM72BQ86X60 149 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 CNTD1Q8N815 330 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 HDAC11Q96DB2 347 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 TSNARE1Q96NA8 513 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 NUF2Q9BZD4 464 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 ADAMTS10Q9H324 1103 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 RHOJQ9H4E5 214 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 TUT1Q9H6E5 874 aaKnown RBP19.4■□□□□ 0.7
SDCBP-204ENST00000447182 CHRAC1Q9NRG0 131 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 CLIC5Q9NZA1 410 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 COX16Q9P0S2 106 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 ZDHHC2Q9UIJ5 367 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 SLC39A10Q9ULF5 831 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 HES2Q9Y543 173 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 TARM1B6A8C7 271 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 AP3B1O00203 1094 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 VILLO15195 856 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 RECQL4O94761 1208 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 YY1P25490 414 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 DNAJB2P25686 324 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 MS4A2Q01362 244 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 NME3Q13232 169 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 KIZQ2M2Z5 673 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 ARMC3Q5W041 872 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 B3GALNT2Q8NCR0 500 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 PDCD6IPQ8WUM4 868 aaKnown RBP19.4■□□□□ 0.7
SDCBP-204ENST00000447182 OTUD5Q96G74 571 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 VAT1Q99536 393 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 ZCWPW1Q9H0M4 648 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 WDR41Q9HAD4 459 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 EFCAB1Q9HAE3 211 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 PPP1R1BQ9UD71 204 aaPredicted RBP19.4■□□□□ 0.7
SDCBP-204ENST00000447182 LZTS1Q9Y250 596 aa19.4■□□□□ 0.7
SDCBP-204ENST00000447182 AMHP03971 560 aa19.39■□□□□ 0.69
SDCBP-204ENST00000447182 NPR3P17342 541 aa19.39■□□□□ 0.69
SDCBP-204ENST00000447182 NOTUMQ6P988 496 aa19.39■□□□□ 0.69
SDCBP-204ENST00000447182 LSMEM2Q8N112 164 aa19.39■□□□□ 0.69
SDCBP-204ENST00000447182 LILRA2Q8N149 483 aa19.39■□□□□ 0.69
SDCBP-204ENST00000447182 BHLHE22Q8NFJ8 381 aaPredicted RBP19.39■□□□□ 0.69
SDCBP-204ENST00000447182 UBE2OQ9C0C9 1292 aaKnown RBP19.39■□□□□ 0.69
SDCBP-204ENST00000447182 CNOT11Q9UKZ1 510 aaKnown RBP19.39■□□□□ 0.69
SDCBP-204ENST00000447182 RBM47A0AV96 593 aaKnown RBP19.39■□□□□ 0.69
SDCBP-204ENST00000447182 ACOT8O14734 319 aa19.39■□□□□ 0.69
SDCBP-204ENST00000447182 PENKP01210 267 aaPredicted RBP19.39■□□□□ 0.69
SDCBP-204ENST00000447182 DPP6P42658 865 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms