RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 LRRC38Q5VT99 294 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 FAM72DQ6L9T8 149 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 FAM72BQ86X60 149 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 OR7D4Q8NG98 312 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 PACSIN1Q9BY11 444 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 ACE2Q9BYF1 805 aaPredicted RBP12.52□□□□□ -0.41
LTBR-204ENST00000444814 TRIM7Q9C029 511 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 BTBD1Q9H0C5 482 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 RAB6CQ9H0N0 254 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 SGK2Q9HBY8 427 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 POLR3BQ9NW08 1133 aaPredicted RBP12.52□□□□□ -0.41
LTBR-204ENST00000444814 GPATCH2LQ9NWQ4 482 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 USP36Q9P275 1121 aaKnown RBP12.52□□□□□ -0.41
LTBR-204ENST00000444814 CYP8B1Q9UNU6 501 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 A0A0D9SEW6 157 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 RASA4BC9J798 803 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 MCF2LO15068 1137 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 RASA4O43374 803 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 BUB1O43683 1085 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 CETN2P41208 172 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 STK19P49842 368 aaPredicted RBP12.51□□□□□ -0.41
LTBR-204ENST00000444814 KIF5AQ12840 1032 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 RFTN1Q14699 578 aaPredicted RBP12.51□□□□□ -0.41
LTBR-204ENST00000444814 GRM3Q14832 879 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 CST6Q15828 149 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 SMTNL2Q2TAL5 461 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 MAP7D1Q3KQU3 841 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 INO80DQ53TQ3 878 aaPredicted RBP12.51□□□□□ -0.41
LTBR-204ENST00000444814 C9orf64Q5T6V5 341 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 PMS2CLQ68D20 193 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 C22orf39Q6P5X5 142 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 CYP2U1Q7Z449 544 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 VSIG1Q86XK7 387 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 RHOT1Q8IXI2 618 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 PLPP6Q8IY26 295 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 FAM160A2Q8N612 972 aaPredicted RBP12.51□□□□□ -0.41
LTBR-204ENST00000444814 SUMF1Q8NBK3 374 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 CADM4Q8NFZ8 388 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.51□□□□□ -0.41
LTBR-204ENST00000444814 LRIG1Q96JA1 1093 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 ZNF830Q96NB3 372 aaPredicted RBP12.51□□□□□ -0.41
LTBR-204ENST00000444814 KCTD15Q96SI1 283 aaPredicted RBP12.51□□□□□ -0.41
LTBR-204ENST00000444814 PSMB7Q99436 277 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 ZNF670Q9BS34 389 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 CALN1Q9BXU9 219 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 MAK16Q9BXY0 300 aaKnown RBP12.51□□□□□ -0.41
LTBR-204ENST00000444814 TSGA10Q9BZW7 698 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 MKRN2Q9H000 416 aaKnown RBP12.51□□□□□ -0.41
LTBR-204ENST00000444814 PABPC3Q9H361 631 aaKnown RBP12.51□□□□□ -0.41
LTBR-204ENST00000444814 SP110Q9HB58 689 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 UBA2Q9UBT2 640 aaPredicted RBP12.51□□□□□ -0.41
LTBR-204ENST00000444814 ZNF212Q9UDV6 495 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 SUSD2Q9UGT4 822 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 SLCO3A1Q9UIG8 710 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 FZD4Q9ULV1 537 aa12.51□□□□□ -0.41
LTBR-204ENST00000444814 MUC3AQ02505 3323 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 CACNA1IQ9P0X4 2223 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 LRRC72A6NJI9 287 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 SLC7A4O43246 635 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 BNIP3LO60238 219 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 SNAP91O60641 907 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 EPN2O95208 641 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 IGSF6O95976 241 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 IL1BP01584 269 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 IGLV3-19P01714 112 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 SRCP12931 536 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 GNSP15586 552 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 ZFXP17010 805 aaPredicted RBP12.5□□□□□ -0.41
LTBR-204ENST00000444814 GOT1P17174 413 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 ERCC2P18074 760 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 SDHBP21912 280 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 GJC1P36383 396 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 DHPSP49366 369 aaPredicted RBP12.5□□□□□ -0.41
LTBR-204ENST00000444814 DNA2P51530 1060 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 TPMTP51580 245 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 RENBPP51606 427 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 COPAP53621 1224 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 RPS14P62263 151 aaKnown RBP12.5□□□□□ -0.41
LTBR-204ENST00000444814 SLC25A11Q02978 314 aaKnown RBP12.5□□□□□ -0.41
LTBR-204ENST00000444814 KCNT1Q5JUK3 1230 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 LYSMD4Q5XG99 296 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 MMAAQ8IVH4 418 aaKnown RBP12.5□□□□□ -0.41
LTBR-204ENST00000444814 SYCE1Q8N0S2 351 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 RYBPQ8N488 228 aaPredicted RBP12.5□□□□□ -0.41
LTBR-204ENST00000444814 ARFGAP1Q8N6T3 406 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 ZNF366Q8N895 744 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 CEP76Q8TAP6 659 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 MYO19Q96H55 970 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 BTBD6Q96KE9 485 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 PEBP4Q96S96 227 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 DUSP15Q9H1R2 295 aaPredicted RBP12.5□□□□□ -0.41
LTBR-204ENST00000444814 CD248Q9HCU0 757 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 OSGEPQ9NPF4 335 aa12.5□□□□□ -0.41
LTBR-204ENST00000444814 CWC15Q9P013 229 aaKnown RBP12.5□□□□□ -0.41
LTBR-204ENST00000444814 IGHV1OR15-9A0A0B4J2B8 117 aa12.49□□□□□ -0.41
LTBR-204ENST00000444814 SOWAHDA6NJG2 315 aa12.49□□□□□ -0.41
LTBR-204ENST00000444814 BTNL10A8MVZ5 291 aa12.49□□□□□ -0.41
LTBR-204ENST00000444814 MEI4A8MW99 385 aa12.49□□□□□ -0.41
LTBR-204ENST00000444814 ZNF487B1APH4 448 aa12.49□□□□□ -0.41
LTBR-204ENST00000444814 DFFAO00273 331 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms