RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 ERMARDQ5T6L9 678 aa19.05■□□□□ 0.64
CCDC188-202ENST00000444532 ALKBH5Q6P6C2 394 aaKnown RBP19.05■□□□□ 0.64
CCDC188-202ENST00000444532 Q6ZVU0 165 aa19.05■□□□□ 0.64
CCDC188-202ENST00000444532 VSTM4Q8IW00 320 aa19.05■□□□□ 0.64
CCDC188-202ENST00000444532 ARHGEF2Q92974 986 aaKnown RBP19.05■□□□□ 0.64
CCDC188-202ENST00000444532 TRIM7Q9C029 511 aa19.05■□□□□ 0.64
CCDC188-202ENST00000444532 NEUROG2Q9H2A3 272 aa19.05■□□□□ 0.64
CCDC188-202ENST00000444532 C6orf106Q9H6K1 298 aaPredicted RBP19.05■□□□□ 0.64
CCDC188-202ENST00000444532 CATSPERBQ9H7T0 1116 aa19.05■□□□□ 0.64
CCDC188-202ENST00000444532 CAPN10Q9HC96 672 aa19.05■□□□□ 0.64
CCDC188-202ENST00000444532 TMEM9BQ9NQ34 198 aa19.05■□□□□ 0.64
CCDC188-202ENST00000444532 DONSONQ9NYP3 566 aa19.05■□□□□ 0.64
CCDC188-202ENST00000444532 DNAI1Q9UI46 699 aa19.05■□□□□ 0.64
CCDC188-202ENST00000444532 HPCAL4Q9UM19 191 aa19.05■□□□□ 0.64
CCDC188-202ENST00000444532 A0A1W2PP55 124 aa19.04■□□□□ 0.64
CCDC188-202ENST00000444532 WASH4PA8MWX3 477 aa19.04■□□□□ 0.64
CCDC188-202ENST00000444532 K7ERQ8 282 aa19.04■□□□□ 0.64
CCDC188-202ENST00000444532 CREB3O43889 395 aa19.04■□□□□ 0.64
CCDC188-202ENST00000444532 RAMP2O60895 175 aa19.04■□□□□ 0.64
CCDC188-202ENST00000444532 RNASEH2AO75792 299 aaKnown RBP19.04■□□□□ 0.64
CCDC188-202ENST00000444532 GLDCP23378 1020 aa19.04■□□□□ 0.64
CCDC188-202ENST00000444532 POLD3Q15054 466 aaPredicted RBP19.04■□□□□ 0.64
CCDC188-202ENST00000444532 TSR1Q2NL82 804 aaKnown RBP19.04■□□□□ 0.64
CCDC188-202ENST00000444532 CCDC122Q5T0U0 273 aa19.04■□□□□ 0.64
CCDC188-202ENST00000444532 LINGO4Q6UY18 593 aa19.04■□□□□ 0.64
CCDC188-202ENST00000444532 PSTKQ8IV42 348 aaKnown RBP19.04■□□□□ 0.64
CCDC188-202ENST00000444532 HDDC3Q8N4P3 179 aa19.04■□□□□ 0.64
CCDC188-202ENST00000444532 AADATQ8N5Z0 425 aa19.04■□□□□ 0.64
CCDC188-202ENST00000444532 ARFGAP1Q8N6T3 406 aa19.04■□□□□ 0.64
CCDC188-202ENST00000444532 RTL3Q8N8U3 475 aaKnown RBP19.04■□□□□ 0.64
CCDC188-202ENST00000444532 DNAJC7Q99615 494 aa19.04■□□□□ 0.64
CCDC188-202ENST00000444532 CEP44Q9C0F1 390 aa19.04■□□□□ 0.64
CCDC188-202ENST00000444532 SERGEFQ9UGK8 458 aa19.04■□□□□ 0.64
CCDC188-202ENST00000444532 PPM1HQ9ULR3 514 aa19.04■□□□□ 0.64
CCDC188-202ENST00000444532 AP4E1Q9UPM8 1137 aa19.04■□□□□ 0.64
CCDC188-202ENST00000444532 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.04■□□□□ 0.64
CCDC188-202ENST00000444532 NUMA1Q14980 2115 aa19.04■□□□□ 0.64
CCDC188-202ENST00000444532 DCHS1Q96JQ0 3298 aa19.03■□□□□ 0.64
CCDC188-202ENST00000444532 A0A1B0GTW7 788 aa19.03■□□□□ 0.64
CCDC188-202ENST00000444532 LRRC72A6NJI9 287 aa19.03■□□□□ 0.64
CCDC188-202ENST00000444532 C4orf47A7E2U8 309 aa19.03■□□□□ 0.64
CCDC188-202ENST00000444532 C1QTNF3-AMACRE9PGA6 284 aa19.03■□□□□ 0.64
CCDC188-202ENST00000444532 CDX4O14627 284 aaPredicted RBP19.03■□□□□ 0.64
CCDC188-202ENST00000444532 TM4SF5O14894 197 aa19.03■□□□□ 0.64
CCDC188-202ENST00000444532 FGF10O15520 208 aaPredicted RBP19.03■□□□□ 0.64
CCDC188-202ENST00000444532 SMAD6O43541 496 aaKnown RBP19.03■□□□□ 0.64
CCDC188-202ENST00000444532 PRPSAP2O60256 369 aa19.03■□□□□ 0.64
CCDC188-202ENST00000444532 SYPP08247 313 aa19.03■□□□□ 0.64
CCDC188-202ENST00000444532 ENGP17813 658 aa19.03■□□□□ 0.64
CCDC188-202ENST00000444532 ACVRL1P37023 503 aa19.03■□□□□ 0.64
CCDC188-202ENST00000444532 SERPINH1P50454 418 aaKnown RBP19.03■□□□□ 0.64
CCDC188-202ENST00000444532 GALCP54803 685 aa19.03■□□□□ 0.64
CCDC188-202ENST00000444532 GEMIN4P57678 1058 aaKnown RBP19.03■□□□□ 0.64
CCDC188-202ENST00000444532 YBEYP58557 167 aaPredicted RBP19.03■□□□□ 0.64
CCDC188-202ENST00000444532 OR2A12Q8NGT7 310 aa19.03■□□□□ 0.64
CCDC188-202ENST00000444532 THAP2Q9H0W7 228 aa19.03■□□□□ 0.64
CCDC188-202ENST00000444532 ZNHIT6Q9NWK9 470 aaKnown RBP19.03■□□□□ 0.64
CCDC188-202ENST00000444532 PCSK1NQ9UHG2 260 aa19.03■□□□□ 0.64
CCDC188-202ENST00000444532 EIF2B4Q9UI10 523 aaKnown RBP19.03■□□□□ 0.64
CCDC188-202ENST00000444532 DCDC2BA2VCK2 349 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 ARHGAP33O14559 1287 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 BCAT2O15382 392 aaPredicted RBP19.02■□□□□ 0.64
CCDC188-202ENST00000444532 BNIP3LO60238 219 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 CYP1A2P05177 515 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 MIPP30301 263 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 PCK1P35558 622 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 EIF4A3P38919 411 aaKnown RBP19.02■□□□□ 0.64
CCDC188-202ENST00000444532 RECQLP46063 649 aaPredicted RBP19.02■□□□□ 0.64
CCDC188-202ENST00000444532 TPI1P60174 286 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 ARF5P84085 180 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 FOXK2Q01167 660 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 PIGHQ14442 188 aaPredicted RBP19.02■□□□□ 0.64
CCDC188-202ENST00000444532 DAB2IPQ5VWQ8 1189 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 C22orf39Q6P5X5 142 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 SARM1Q6SZW1 724 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 PCDH20Q8N6Y1 951 aaKnown RBP19.02■□□□□ 0.64
CCDC188-202ENST00000444532 TMIEQ8NEW7 156 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 OR2T34Q8NGX1 318 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 C1orf216Q8TAB5 229 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 PIP4K2CQ8TBX8 421 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 FAM131CQ96AQ9 280 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 ISG20Q96AZ6 181 aaKnown RBP19.02■□□□□ 0.64
CCDC188-202ENST00000444532 BIRC7Q96CA5 298 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 MIR1-1HGQ9H1L0 117 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 KDM4CQ9H3R0 1056 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 DHX35Q9H5Z1 703 aaKnown RBP19.02■□□□□ 0.64
CCDC188-202ENST00000444532 SARDHQ9UL12 918 aa19.02■□□□□ 0.64
CCDC188-202ENST00000444532 ADAMTS9Q9P2N4 1935 aa19.02■□□□□ 0.63
CCDC188-202ENST00000444532 PCDH15Q96QU1 1955 aa19.01■□□□□ 0.63
CCDC188-202ENST00000444532 ZSCAN5CA6NGD5 496 aaPredicted RBP19.01■□□□□ 0.63
CCDC188-202ENST00000444532 SLC7A4O43246 635 aa19.01■□□□□ 0.63
CCDC188-202ENST00000444532 KDELR3O43731 214 aa19.01■□□□□ 0.63
CCDC188-202ENST00000444532 LRCH4O75427 683 aa19.01■□□□□ 0.63
CCDC188-202ENST00000444532 ZNF821O75541 412 aaPredicted RBP19.01■□□□□ 0.63
CCDC188-202ENST00000444532 FSBPO95073 299 aa19.01■□□□□ 0.63
CCDC188-202ENST00000444532 CHRNA3P32297 505 aa19.01■□□□□ 0.63
CCDC188-202ENST00000444532 DRD3P35462 400 aa19.01■□□□□ 0.63
CCDC188-202ENST00000444532 ZNF135P52742 658 aaPredicted RBP19.01■□□□□ 0.63
CCDC188-202ENST00000444532 ATXN3P54252 364 aaPredicted RBP19.01■□□□□ 0.63
CCDC188-202ENST00000444532 MAPK8IP2Q13387 824 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms