RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 ACE2Q9BYF1 805 aaPredicted RBP19.27■□□□□ 0.68
ATPAF2-201ENST00000444058 CEP44Q9C0F1 390 aa19.27■□□□□ 0.68
ATPAF2-201ENST00000444058 TAS2R14Q9NYV8 317 aa19.27■□□□□ 0.68
ATPAF2-201ENST00000444058 BZW2Q9Y6E2 419 aaKnown RBP19.27■□□□□ 0.68
ATPAF2-201ENST00000444058 ASCC3Q8N3C0 2202 aaKnown RBP19.27■□□□□ 0.67
ATPAF2-201ENST00000444058 FAM72CH0Y354 149 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 CCP110O43303 1012 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 ZNF883P0CG24 379 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 DRD3P35462 400 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 ADPRHP54922 357 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 KLHL30Q0D2K2 578 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 CCDC15Q0P6D6 951 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 HNRNPDQ14103 355 aaKnown RBP19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 EFHC2Q5JST6 749 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 N4BP2L1Q5TBK1 243 aaPredicted RBP19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 FAM72AQ5TYM5 149 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 E4F1Q66K89 784 aaPredicted RBP19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 FAM72DQ6L9T8 149 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 RWDD4Q6NW29 188 aaKnown RBP19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 NCEH1Q6PIU2 408 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 FAM72BQ86X60 149 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 TMIEQ8NEW7 156 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 OR7D4Q8NG98 312 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 OR2A12Q8NGT7 310 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 SPON2Q9BUD6 331 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 MAGEH1Q9H213 219 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 ATP13A1Q9HD20 1204 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 NEU3Q9UQ49 428 aa19.26■□□□□ 0.67
ATPAF2-201ENST00000444058 A0A1W2PPC4 97 aa19.25■□□□□ 0.67
ATPAF2-201ENST00000444058 K7ERQ8 282 aa19.25■□□□□ 0.67
ATPAF2-201ENST00000444058 CBX4O00257 560 aa19.25■□□□□ 0.67
ATPAF2-201ENST00000444058 CER1O95813 267 aa19.25■□□□□ 0.67
ATPAF2-201ENST00000444058 SERPINH1P50454 418 aaKnown RBP19.25■□□□□ 0.67
ATPAF2-201ENST00000444058 GEMIN4P57678 1058 aaKnown RBP19.25■□□□□ 0.67
ATPAF2-201ENST00000444058 RACK1P63244 317 aaKnown RBP19.25■□□□□ 0.67
ATPAF2-201ENST00000444058 DRC7Q8IY82 874 aa19.25■□□□□ 0.67
ATPAF2-201ENST00000444058 OR14C36Q8NHC7 312 aa19.25■□□□□ 0.67
ATPAF2-201ENST00000444058 PIP4K2CQ8TBX8 421 aa19.25■□□□□ 0.67
ATPAF2-201ENST00000444058 FNIP1Q8TF40 1166 aa19.25■□□□□ 0.67
ATPAF2-201ENST00000444058 TM9SF3Q9HD45 589 aa19.25■□□□□ 0.67
ATPAF2-201ENST00000444058 SARDHQ9UL12 918 aa19.25■□□□□ 0.67
ATPAF2-201ENST00000444058 FAM47DPA6NHR8 397 aa19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 EIF3CLB5ME19 914 aaKnown RBP19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 DDX3XO00571 662 aaKnown RBP eCLIP19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 SMAD6O43541 496 aaKnown RBP19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 PLRG1O43660 514 aaKnown RBP19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 RTN2O75298 545 aa19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 FTLP02792 175 aaPredicted RBP19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 PRNPP04156 253 aa19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 MYBL1P10243 752 aa19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 CD59P13987 128 aa19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 CHRNA3P32297 505 aa19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 HTR7P34969 479 aa19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 NUDT1P36639 197 aa19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 CSNK1EP49674 416 aaKnown RBP19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 ARF5P84085 180 aa19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 BNC1Q01954 994 aa19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 SCYL2Q6P3W7 929 aa19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 C22orf39Q6P5X5 142 aa19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 TMC6Q7Z403 805 aa19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 PLPP6Q8IY26 295 aa19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 PCDH20Q8N6Y1 951 aaKnown RBP19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 ARHGEF2Q92974 986 aaKnown RBP19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 ISG20Q96AZ6 181 aaKnown RBP19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 TRIM11Q96F44 468 aa19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 EIF3CQ99613 913 aaKnown RBP19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 EPAS1Q99814 870 aa19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 FZD10Q9ULW2 581 aa19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 SLCO1B1Q9Y6L6 691 aa19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 NYNRINQ9P2P1 1898 aaKnown RBP19.24■□□□□ 0.67
ATPAF2-201ENST00000444058 TMEM191CA6NGB0 347 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 TMCO5BA8MYB1 307 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 LATO43561 262 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 RAMP2O60895 175 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 ZNF821O75541 412 aaPredicted RBP19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 KCNA4P22459 653 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 GLDCP23378 1020 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 PMLP29590 882 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 RECQLP46063 649 aaPredicted RBP19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 OGDHQ02218 1023 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 HLA-BQ31612 363 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 AGBL4Q5VU57 503 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 LINGO4Q6UY18 593 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 RTL3Q8N8U3 475 aaKnown RBP19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 OR2I1PQ8NGU4 316 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 SKA1Q96BD8 255 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 NCAPGQ9BPX3 1015 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 MAGEB5Q9BZ81 275 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 ISCUQ9H1K1 167 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 NDFIP2Q9NV92 336 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 DONSONQ9NYP3 566 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 DNAI1Q9UI46 699 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 HPCAL4Q9UM19 191 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 CAPN11Q9UMQ6 739 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 PCDHGB2Q9Y5G2 931 aa19.23■□□□□ 0.67
ATPAF2-201ENST00000444058 ADAMTS9Q9P2N4 1935 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 TBC1D3DA0A087WVF3 549 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 TBC1D3IA0A087WXS9 549 aa19.22■□□□□ 0.67
ATPAF2-201ENST00000444058 TBC1D3EA0A087X179 549 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms