RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 BUB1O43683 1085 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 MFSD11O43934 449 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 PEX11BO96011 259 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 TGM1P22735 817 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 DRD3P35462 400 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 ARHGAP25P42331 645 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 CDH6P55285 790 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 SULT2A1Q06520 285 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 NCBP2-AS2Q69YL0 99 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 KIAA1324Q6UXG2 1013 aaKnown RBP13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 METTL3Q86U44 580 aaKnown RBP13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 CCDC117Q8IWD4 279 aaPredicted RBP13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 AADATQ8N5Z0 425 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 OR2A12Q8NGT7 310 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 KRT35Q92764 455 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 FAM131CQ96AQ9 280 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 HERPUD2Q9BSE4 406 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 SPON2Q9BUD6 331 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 C2orf49Q9BVC5 232 aaPredicted RBP13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 TNKS2Q9H2K2 1166 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 PRDM16Q9HAZ2 1276 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 LHX3Q9UBR4 397 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 CYP8B1Q9UNU6 501 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 ADGRG1Q9Y653 693 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 WDR87Q6ZQQ6 2873 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 GVINP1Q7Z2Y8 2422 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 ZNF292O60281 2723 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 ADAMTS9Q9P2N4 1935 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 TARSL2A2RTX5 802 aaKnown RBP13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 GRID2IPA4D2P6 1211 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 GOLGA6L3A6NEY3 463 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 MID1O15344 667 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 KDELR3O43731 214 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 PI4KAP42356 2102 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 RGRP47804 291 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 PAPOLAP51003 745 aaKnown RBP13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 TPMTP51580 245 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 YBEYP58557 167 aaPredicted RBP13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 ADCY2Q08462 1091 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 SLC10A2Q12908 348 aaPredicted RBP13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 STARD3Q14849 445 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 POLD3Q15054 466 aaPredicted RBP13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 TAZQ16635 292 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 FAM182AQ5T1J6 154 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 PMS2CLQ68D20 193 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 SDE2Q6IQ49 451 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 C11orf63Q6NUN7 778 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 SLC41A1Q8IVJ1 513 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 LRRC8AQ8IWT6 810 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 DCLK2Q8N568 766 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 PDLIM2Q96JY6 352 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 ZC3H10Q96K80 434 aaKnown RBP13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 NCAPGQ9BPX3 1015 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 IRF2BPLQ9H1B7 796 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 KCNF1Q9H3M0 494 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 CATSPERBQ9H7T0 1116 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 PARD6AQ9NPB6 346 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 ITM2CQ9NQX7 267 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 BCCIPQ9P287 314 aaKnown RBP eCLIP13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 SLC25A13Q9UJS0 675 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 ALG6Q9Y672 507 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 SLCO1B1Q9Y6L6 691 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 WASF2Q9Y6W5 498 aa13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 EP300Q09472 2414 aaPredicted RBP13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 RIF1Q5UIP0 2472 aaKnown RBP13.11□□□□□ -0.31
PDLIM2-212ENST00000443561 H3BRJ5 948 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 MUSKO15146 869 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 SYNCRIPO60506 623 aaKnown RBP13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 PRAMEF11O60813 436 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 GJB3O75712 270 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 ALDH1A2O94788 518 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 TMCC1O94876 653 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 MAP3K6O95382 1288 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 DESP17661 470 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 KDELR1P24390 212 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 GKP32189 559 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 CNR2P34972 360 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 PTGER3P43115 390 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 SSR1P43307 286 aaKnown RBP13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 NDST2P52849 883 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 GSDMDP57764 484 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 ST8SIA6P61647 398 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 KRT83P78385 493 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 SIM2Q14190 667 aaPredicted RBP13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 CYTH1Q15438 398 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 SPA17Q15506 151 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 CST6Q15828 149 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 PARP15Q460N3 678 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 ZNF776Q68DI1 518 aaPredicted RBP13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 IL31Q6EBC2 164 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 ZC3H14Q6PJT7 736 aaKnown RBP13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 DPY19L3Q6ZPD9 716 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 MMAAQ8IVH4 418 aaKnown RBP13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 PLD5Q8N7P1 536 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 LRRN4Q8WUT4 740 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 ARRDC3Q96B67 414 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 SIPA1Q96FS4 1042 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 ZNF670Q9BS34 389 aa13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 PABPC3Q9H361 631 aaKnown RBP13.1□□□□□ -0.31
PDLIM2-212ENST00000443561 WSB2Q9NYS7 404 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms