RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 KLC2Q9H0B6 622 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 USP44Q9H0E7 712 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 GOLPH3Q9H4A6 298 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 COG4Q9H9E3 785 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 MCCC2Q9HCC0 563 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 GPAMQ9HCL2 828 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 PDGFCQ9NRA1 345 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 IARS2Q9NSE4 1012 aaKnown RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 C20orf96Q9NUD7 363 aaPredicted RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 SAGE1Q9NXZ1 904 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 NCDNQ9UBB6 729 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 MALT1Q9UDY8 824 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 EBF1Q9UH73 591 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 CYTH4Q9UIA0 394 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 AMFRQ9UKV5 643 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 KLHL20Q9Y2M5 609 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 UGT2A1Q9Y4X1 527 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TAF6LQ9Y6J9 622 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 PCNX1Q96RV3 2341 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 EXOC1LA0A1B0GW35 172 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PVALEFA0A1B0GWK0 134 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 GTPBP10A4D1E9 387 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 TRIM49BA6NDI0 452 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SOBPA7XYQ1 873 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 FCHO1O14526 889 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TRAFD1O14545 582 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 AURKAO14965 403 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SIAH2O43255 324 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TSC22D2O75157 780 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 CSDE1O75534 798 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 SCO1O75880 301 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 KRT37O76014 449 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PDE8BO95263 885 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 FGAP02671 866 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SLC4A1P02730 911 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ITGB3P05106 788 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 S100A9P06702 114 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 SMIM18P0DKX4 95 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ITGA4P13612 1032 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ZNF23P17027 643 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ATP6V1E1P36543 226 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 MAPKAPK2P49137 400 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 GDI2P50395 445 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 METAP2P50579 478 aaKnown RBP eCLIP2.82□□□□□ -1.96
LIG4-203ENST00000442234 MAPK12P53778 367 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 NPEPPSP55786 919 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 EIF3EP60228 445 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 ACTR3P61158 418 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 CSNK2BP67870 215 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 MYBPC1Q00872 1141 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PPATQ06203 517 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 DBPQ10586 325 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 GRM2Q14416 872 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 NEDD8Q15843 81 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 LSM12Q3MHD2 195 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 SPATS1Q496A3 300 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 C6orf52Q5T4I8 152 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 KRT74Q7RTS7 529 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ADCK1Q86TW2 530 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ZNF677Q86XU0 584 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 CACUL1Q86Y37 369 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 CAMK1DQ8IU85 385 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 IFNL3Q8IZI9 196 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SYCE1Q8N0S2 351 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 C4orf33Q8N1A6 199 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 FBXL16Q8N461 479 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 C12orf76Q8N812 135 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 ZSWIM2Q8NEG5 633 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SNIP1Q8TAD8 396 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 TEX47Q8TBZ9 253 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 FAM151AQ8WW52 585 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 HLA-CQ95604 372 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TMIGD2Q96BF3 282 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PPWD1Q96BP3 646 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 ISOC1Q96CN7 298 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SHISA4Q96DD7 197 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 MSANTD3Q96H12 275 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SLC39A13Q96H72 371 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PPP1R36Q96LQ0 422 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 GAL3ST1Q99999 423 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 C17orf62Q9BQA9 187 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 LRFN3Q9BTN0 628 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ANO3Q9BYT9 981 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PBX4Q9BYU1 374 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 GCOM2Q9BZD3 368 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 WDR12Q9GZL7 423 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 ADAM7Q9H2U9 754 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 NARFLQ9H6Q4 476 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ERVMER34-1Q9H9K5 563 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SYTL2Q9HCH5 934 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ATP13A2Q9NQ11 1180 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TIGARQ9NQ88 270 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 FBXO6Q9NRD1 293 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 ABCB10Q9NRK6 738 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SLC39A1Q9NY26 324 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 CD274Q9NZQ7 290 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 GNEQ9Y223 722 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 MTO1Q9Y2Z2 717 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 RAD54BQ9Y620 910 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 CPQQ9Y646 472 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms