RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 SNAP91O60641 907 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 RNGTTO60942 597 aaKnown RBP12.05□□□□□ -0.48
TTC28-203ENST00000442232 DKK1O94907 266 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 MMEP08473 750 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 C1SP09871 688 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 TFE3P19532 575 aaPredicted RBP12.05□□□□□ -0.48
TTC28-203ENST00000442232 RRM1P23921 792 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 AKT2P31751 481 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 ETFBP38117 255 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 ANP32AP39687 249 aaKnown RBP12.05□□□□□ -0.48
TTC28-203ENST00000442232 METAP1P53582 386 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 SYCP1Q15431 976 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 NEK5Q6P3R8 708 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 DHRS13Q6UX07 377 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 NOP9Q86U38 636 aaKnown RBP12.05□□□□□ -0.48
TTC28-203ENST00000442232 TMPRSS12Q86WS5 348 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 FAM131BQ86XD5 332 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 PDCD7Q8N8D1 485 aaKnown RBP12.05□□□□□ -0.48
TTC28-203ENST00000442232 TMIEQ8NEW7 156 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 MDM1Q8TC05 714 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 GRIN3AQ8TCU5 1115 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 EPS8L1Q8TE68 723 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 SAP25Q8TEE9 199 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 CPA5Q8WXQ8 436 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 NT5C3BQ969T7 300 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 FAM131CQ96AQ9 280 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 PCMTD1Q96MG8 357 aaPredicted RBP12.05□□□□□ -0.48
TTC28-203ENST00000442232 CFAP57Q96MR6 1250 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 NAA15Q9BXJ9 866 aaKnown RBP12.05□□□□□ -0.48
TTC28-203ENST00000442232 ZYG11BQ9C0D3 744 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 ATP13A1Q9HD20 1204 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 METTL5Q9NRN9 209 aaKnown RBP12.05□□□□□ -0.48
TTC28-203ENST00000442232 IL36AQ9UHA7 158 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 RALYQ9UKM9 306 aaKnown RBP12.05□□□□□ -0.48
TTC28-203ENST00000442232 DAAM1Q9Y4D1 1078 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 PCDHGA1Q9Y5H4 931 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 SNX10Q9Y5X0 201 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 DOCK9Q9BZ29 2069 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 ACACAQ13085 2346 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 ZFHX4Q86UP3 3567 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 DRGXA6NNA5 263 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 WNT9AO14904 365 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 GFPT2O94808 682 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 PCDH8O95206 1070 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 SDC4P31431 198 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 FLT3P36888 993 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 DNA2P51530 1060 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 NOMO3P69849 1222 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 ATP11AP98196 1134 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 SLC20A2Q08357 652 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 KCNMA1Q12791 1236 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 SMAD1Q15797 465 aaKnown RBP12.04□□□□□ -0.48
TTC28-203ENST00000442232 CDO1Q16878 200 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 LINGO4Q6UY18 593 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 TRIM72Q6ZMU5 477 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 DRC7Q8IY82 874 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 OR7D4Q8NG98 312 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 NXPE2Q96DL1 559 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 KLHDC7BQ96G42 594 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 PSMB7Q99436 277 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 MYOCQ99972 504 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 CEP44Q9C0F1 390 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 VPS16Q9H269 839 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 TNKS2Q9H2K2 1166 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 ZZEF1O43149 2961 aa12.04□□□□□ -0.48
TTC28-203ENST00000442232 ADAMTS20P59510 1910 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 TRPM6Q9BX84 2022 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 DSPP15924 2871 aaKnown RBP12.03□□□□□ -0.48
TTC28-203ENST00000442232 IGLV3-10A0A075B6K4 115 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 A0A0D9SEW6 157 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 A0A1W2PQU0 124 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 FAM149AA5PLN7 773 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 ANKRD62A6NC57 917 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 C10orf142B7Z368 130 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 K7ERQ8 282 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 SLC31A1O15431 190 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 MT-CO1P00395 513 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 CTSLP07711 333 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 THEGLP0DJG4 465 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 JUPP14923 745 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 DESP17661 470 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 SOX5P35711 763 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 NSFP46459 744 aaKnown RBP12.03□□□□□ -0.48
TTC28-203ENST00000442232 RXRGP48443 463 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 SERPINH1P50454 418 aaKnown RBP12.03□□□□□ -0.48
TTC28-203ENST00000442232 NEK3P51956 506 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 GEMIN4P57678 1058 aaKnown RBP12.03□□□□□ -0.48
TTC28-203ENST00000442232 POLR2FP61218 127 aaKnown RBP12.03□□□□□ -0.48
TTC28-203ENST00000442232 CDR2Q01850 454 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 GNA12Q03113 381 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 SHBQ15464 509 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 C2CD6Q53TS8 623 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 PIP5KL1Q5T9C9 394 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 RWDD4Q6NW29 188 aaKnown RBP12.03□□□□□ -0.48
TTC28-203ENST00000442232 ERN2Q76MJ5 926 aaKnown RBP12.03□□□□□ -0.48
TTC28-203ENST00000442232 ARCQ7LC44 396 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 HORMAD1Q86X24 394 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 PCDH20Q8N6Y1 951 aaKnown RBP12.03□□□□□ -0.48
TTC28-203ENST00000442232 OR2A12Q8NGT7 310 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 C11orf70Q9BRQ4 267 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms