RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 SLC6A17Q9H1V8 727 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 MTG2Q9H4K7 406 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 LRRC19Q9H756 370 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 MBD1Q9UIS9 605 aaPredicted RBP15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 FARP1Q9Y4F1 1045 aaPredicted RBP15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 ARHGAP42A6NI28 874 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 BTNL10A8MVZ5 291 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 MCF2LO15068 1137 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 DCLK1O15075 740 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 MAP3K13O43283 966 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 LRP3O75074 770 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 ADH1BP00325 375 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 BCKDHBP21953 392 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 GLDCP23378 1020 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 CD6P30203 668 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 NUMBP49757 651 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 ARSEP51690 589 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 CDH6P55285 790 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 SERINC3Q13530 473 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 KRT81Q14533 505 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 LRRC38Q5VT99 294 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 AFMIDQ63HM1 303 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 C22orf39Q6P5X5 142 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 LPCAT2Q7L5N7 544 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 VSIG1Q86XK7 387 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 MAP7D3Q8IWC1 876 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 PLPP6Q8IY26 295 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 STK40Q8N2I9 435 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 PCDH20Q8N6Y1 951 aaKnown RBP15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 CSPG4P5Q96PW8 444 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 KLC2Q9H0B6 622 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 PCDH18Q9HCL0 1135 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 WSB2Q9NYS7 404 aaPredicted RBP15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 NCDNQ9UBB6 729 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 CYP8B1Q9UNU6 501 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 INVSQ9Y283 1065 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 PCDHGA5Q9Y5G8 931 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 OTOGLQ3ZCN5 2332 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 SHROOM3Q8TF72 1996 aa15.35■□□□□ 0.05
CSNK1E-210ENST00000442216 PJA2O43164 708 aa15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 EPN2O95208 641 aa15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 CD160O95971 181 aa15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 C5AR1P21730 350 aa15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 HOXD11P31277 338 aaPredicted RBP15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 DPP6P42658 865 aa15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 NOP2P46087 812 aaKnown RBP15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 TAS2R40P59535 323 aa15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 CST6Q15828 149 aa15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 INO80DQ53TQ3 878 aaPredicted RBP15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 FAM46CQ5VWP2 391 aa15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 LINGO4Q6UY18 593 aa15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 ALYREFQ86V81 257 aaKnown RBP15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 GPR161Q8N6U8 529 aaKnown RBP15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 KCTD6Q8NC69 237 aa15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 HMCESQ96FZ2 354 aa15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 ZNF670Q9BS34 389 aa15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 PCED1AQ9H1Q7 454 aa15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 PABPC3Q9H361 631 aaKnown RBP15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 GRPEL1Q9HAV7 217 aa15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 NCKAP1Q9Y2A7 1128 aa15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 NUMA1Q14980 2115 aa15.34■□□□□ 0.05
CSNK1E-210ENST00000442216 SDK1Q7Z5N4 2213 aa15.33■□□□□ 0.05
CSNK1E-210ENST00000442216 FAM186AA6NE01 2351 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 GOLGA6L3A6NEY3 463 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 TMEM110-MUSTN1A8MSY1 372 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 ZNF487B1APH4 448 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 K7ERQ8 282 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 SMAD6O43541 496 aaKnown RBP15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 NDUFS2O75306 463 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 ZNF821O75541 412 aaPredicted RBP15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 VAV1P15498 845 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 IL4RP24394 825 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 SERPINB6P35237 376 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 PI4KAP42356 2102 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 RECQLP46063 649 aaPredicted RBP15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 VAV2P52735 878 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 RPL6Q02878 288 aaKnown RBP15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 DPYSL3Q14195 570 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 LPAL2Q16609 132 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 ATP13A4Q4VNC1 1196 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 TMCO3Q6UWJ1 677 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 Q6ZVU0 165 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 ZNF354CQ86Y25 554 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 MMAAQ8IVH4 418 aaKnown RBP15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 ARHGAP12Q8IWW6 846 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 FRMD1Q8N878 549 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 CCDC112Q8NEF3 446 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 TMIEQ8NEW7 156 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 CADM4Q8NFZ8 388 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 OR2A12Q8NGT7 310 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 FOXJ1Q92949 421 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 SLC39A8Q9C0K1 460 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 SGK2Q9HBY8 427 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 PPM1HQ9ULR3 514 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 FZD4Q9ULV1 537 aa15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 REXO2Q9Y3B8 237 aaKnown RBP15.33■□□□□ 0.04
CSNK1E-210ENST00000442216 C1QTNF3-AMACRE9PGA6 284 aa15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 BUB1O43683 1085 aa15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 GSRP00390 522 aa15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 PRNPP04156 253 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms